Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Crnkl1P63154 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.4□□□□□ -0.42
Crnkl1P63154 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Crnkl1P63154 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Crnkl1P63154 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.4□□□□□ -0.42
Crnkl1P63154 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Crnkl1P63154 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.4□□□□□ -0.42
Crnkl1P63154 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.4□□□□□ -0.42
Crnkl1P63154 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.4□□□□□ -0.42
Crnkl1P63154 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.4□□□□□ -0.42
Crnkl1P63154 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.4□□□□□ -0.42
Crnkl1P63154 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Crnkl1P63154 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Crnkl1P63154 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Crnkl1P63154 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Crnkl1P63154 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Crnkl1P63154 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Crnkl1P63154 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Crnkl1P63154 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Crnkl1P63154 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.39□□□□□ -0.43
Crnkl1P63154 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.39□□□□□ -0.43
Crnkl1P63154 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Crnkl1P63154 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.39□□□□□ -0.43
Crnkl1P63154 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.39□□□□□ -0.43
Crnkl1P63154 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.39□□□□□ -0.43
Crnkl1P63154 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.39□□□□□ -0.43
Crnkl1P63154 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.39□□□□□ -0.43
Crnkl1P63154 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Crnkl1P63154 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.39□□□□□ -0.43
Crnkl1P63154 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.39□□□□□ -0.43
Crnkl1P63154 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.39□□□□□ -0.43
Crnkl1P63154 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Crnkl1P63154 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crnkl1P63154 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Crnkl1P63154 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crnkl1P63154 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.38□□□□□ -0.43
Crnkl1P63154 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crnkl1P63154 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Crnkl1P63154 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crnkl1P63154 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crnkl1P63154 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crnkl1P63154 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Crnkl1P63154 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.38□□□□□ -0.43
Crnkl1P63154 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms