Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Nphp4P59240 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nphp4P59240 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC16.79■□□□□ 0.28
Nphp4P59240 Gm5732-201ENSMUST00000182596 1007 ntBASIC16.79■□□□□ 0.28
Nphp4P59240 Gm8100-201ENSMUST00000182906 988 ntBASIC16.79■□□□□ 0.28
Nphp4P59240 Gm44124-201ENSMUST00000204159 472 ntBASIC16.79■□□□□ 0.28
Nphp4P59240 CT009718.3-201ENSMUST00000221116 367 ntBASIC16.79■□□□□ 0.28
Nphp4P59240 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC16.79■□□□□ 0.28
Nphp4P59240 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nphp4P59240 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Nphp4P59240 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nphp4P59240 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nphp4P59240 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nphp4P59240 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nphp4P59240 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nphp4P59240 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nphp4P59240 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nphp4P59240 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nphp4P59240 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nphp4P59240 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC16.78■□□□□ 0.28
Nphp4P59240 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
Nphp4P59240 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nphp4P59240 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Nphp4P59240 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nphp4P59240 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nphp4P59240 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nphp4P59240 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nphp4P59240 Gm37835-201ENSMUST00000193305 361 ntBASIC16.78■□□□□ 0.28
Nphp4P59240 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC16.78■□□□□ 0.28
Nphp4P59240 Gm45118-201ENSMUST00000208928 825 ntBASIC16.78■□□□□ 0.28
Nphp4P59240 AC159819.2-201ENSMUST00000216151 342 ntBASIC16.78■□□□□ 0.28
Nphp4P59240 Gm18556-201ENSMUST00000219748 1031 ntBASIC16.78■□□□□ 0.28
Nphp4P59240 Gm29787-201ENSMUST00000222129 849 ntBASIC16.78■□□□□ 0.28
Nphp4P59240 Gm1821-202ENSMUST00000227415 750 ntBASIC16.78■□□□□ 0.28
Nphp4P59240 Ginm1-202ENSMUST00000065124 300 ntBASIC16.78■□□□□ 0.28
Nphp4P59240 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nphp4P59240 Gm43081-201ENSMUST00000199082 1380 ntBASIC16.78■□□□□ 0.28
Nphp4P59240 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nphp4P59240 Gm43267-201ENSMUST00000199664 1796 ntBASIC16.77■□□□□ 0.28
Nphp4P59240 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nphp4P59240 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nphp4P59240 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nphp4P59240 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nphp4P59240 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Nphp4P59240 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nphp4P59240 Gm43447-201ENSMUST00000198471 1535 ntBASIC16.77■□□□□ 0.28
Nphp4P59240 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Nphp4P59240 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
Nphp4P59240 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nphp4P59240 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nphp4P59240 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC16.77■□□□□ 0.27
Nphp4P59240 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nphp4P59240 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC16.77■□□□□ 0.27
Nphp4P59240 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nphp4P59240 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nphp4P59240 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nphp4P59240 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nphp4P59240 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Nphp4P59240 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Nphp4P59240 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Nphp4P59240 Gm15004-201ENSMUST00000119192 630 ntBASIC16.77■□□□□ 0.27
Nphp4P59240 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nphp4P59240 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nphp4P59240 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nphp4P59240 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nphp4P59240 Mir7686-201ENSMUST00000200604 57 ntBASIC16.77■□□□□ 0.27
Nphp4P59240 Gm9785-201ENSMUST00000062642 1006 ntBASIC16.77■□□□□ 0.27
Nphp4P59240 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nphp4P59240 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nphp4P59240 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nphp4P59240 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nphp4P59240 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.76■□□□□ 0.27
Nphp4P59240 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC16.76■□□□□ 0.27
Nphp4P59240 Gm8285-201ENSMUST00000208293 759 ntBASIC16.76■□□□□ 0.27
Nphp4P59240 Gm45909-201ENSMUST00000212413 1031 ntBASIC16.76■□□□□ 0.27
Nphp4P59240 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Nphp4P59240 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Nphp4P59240 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nphp4P59240 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms