Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Gm11618-201ENSMUST00000117946 267 ntBASIC10.1□□□□□ -0.79
Sssca1P56873 Gm14704-201ENSMUST00000120300 874 ntBASIC10.1□□□□□ -0.79
Sssca1P56873 Gm14057-201ENSMUST00000120631 482 ntBASIC10.1□□□□□ -0.79
Sssca1P56873 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Mir6392-201ENSMUST00000184924 108 ntBASIC10.1□□□□□ -0.79
Sssca1P56873 Gm44855-201ENSMUST00000205725 362 ntBASIC10.1□□□□□ -0.79
Sssca1P56873 Gm20949-201ENSMUST00000206478 952 ntBASIC10.1□□□□□ -0.79
Sssca1P56873 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.1□□□□□ -0.79
Sssca1P56873 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
Sssca1P56873 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.1□□□□□ -0.79
Sssca1P56873 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.1□□□□□ -0.79
Sssca1P56873 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.1□□□□□ -0.79
Sssca1P56873 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Sssca1P56873 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Sssca1P56873 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Sssca1P56873 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.1□□□□□ -0.79
Sssca1P56873 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Sssca1P56873 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.1□□□□□ -0.79
Sssca1P56873 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Sssca1P56873 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Sssca1P56873 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.09□□□□□ -0.79
Sssca1P56873 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Sssca1P56873 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.09□□□□□ -0.79
Sssca1P56873 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
Sssca1P56873 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Sssca1P56873 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.09□□□□□ -0.79
Sssca1P56873 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 Gm23363-201ENSMUST00000175024 79 ntBASIC10.09□□□□□ -0.79
Sssca1P56873 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Gm7063-201ENSMUST00000186840 981 ntBASIC10.09□□□□□ -0.79
Sssca1P56873 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.09□□□□□ -0.79
Sssca1P56873 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.09□□□□□ -0.79
Sssca1P56873 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.09□□□□□ -0.79
Sssca1P56873 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.09□□□□□ -0.79
Sssca1P56873 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms