Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rrp1P56183 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.1□□□□□ -0.15
Rrp1P56183 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.1□□□□□ -0.15
Rrp1P56183 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 Gm13369-201ENSMUST00000119442 987 ntBASIC14.1□□□□□ -0.15
Rrp1P56183 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.1□□□□□ -0.15
Rrp1P56183 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Rrp1P56183 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Rrp1P56183 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Rrp1P56183 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.1□□□□□ -0.15
Rrp1P56183 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Rrp1P56183 Paupar-201ENSMUST00000194826 3482 ntBASIC14.1□□□□□ -0.15
Rrp1P56183 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.1□□□□□ -0.15
Rrp1P56183 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rrp1P56183 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.09□□□□□ -0.15
Rrp1P56183 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Rrp1P56183 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rrp1P56183 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.09□□□□□ -0.15
Rrp1P56183 Rmrp-201ENSMUST00000157463 271 ntBASIC14.09□□□□□ -0.15
Rrp1P56183 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Gm38092-201ENSMUST00000195600 653 ntBASIC14.09□□□□□ -0.15
Rrp1P56183 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.09□□□□□ -0.15
Rrp1P56183 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.09□□□□□ -0.15
Rrp1P56183 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rrp1P56183 Gm10146-201ENSMUST00000072739 309 ntBASIC14.09□□□□□ -0.15
Rrp1P56183 Gm24136-201ENSMUST00000083374 165 ntBASIC14.09□□□□□ -0.15
Rrp1P56183 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rrp1P56183 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rrp1P56183 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp1P56183 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rrp1P56183 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rrp1P56183 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.08□□□□□ -0.15
Rrp1P56183 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.08□□□□□ -0.15
Rrp1P56183 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.08□□□□□ -0.16
Rrp1P56183 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.08□□□□□ -0.16
Rrp1P56183 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rrp1P56183 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.08□□□□□ -0.16
Rrp1P56183 Gm12363-201ENSMUST00000122250 668 ntBASIC14.08□□□□□ -0.16
Rrp1P56183 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.08□□□□□ -0.16
Rrp1P56183 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.08□□□□□ -0.16
Rrp1P56183 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Rrp1P56183 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp1P56183 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.07□□□□□ -0.16
Rrp1P56183 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms