Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.46□□□□□ -0.41
Atxn1P54254 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Atxn1P54254 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.46□□□□□ -0.41
Atxn1P54254 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Atxn1P54254 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atxn1P54254 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atxn1P54254 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atxn1P54254 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.46□□□□□ -0.41
Atxn1P54254 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atxn1P54254 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Atxn1P54254 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atxn1P54254 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.46□□□□□ -0.41
Atxn1P54254 Gm12029-201ENSMUST00000120073 832 ntBASIC12.46□□□□□ -0.41
Atxn1P54254 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.46□□□□□ -0.41
Atxn1P54254 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.46□□□□□ -0.41
Atxn1P54254 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.46□□□□□ -0.41
Atxn1P54254 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atxn1P54254 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.46□□□□□ -0.41
Atxn1P54254 Gzmn-202ENSMUST00000225535 989 ntBASIC12.46□□□□□ -0.41
Atxn1P54254 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.46□□□□□ -0.41
Atxn1P54254 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atxn1P54254 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atxn1P54254 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atxn1P54254 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atxn1P54254 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atxn1P54254 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atxn1P54254 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Atxn1P54254 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atxn1P54254 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atxn1P54254 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.46□□□□□ -0.42
Atxn1P54254 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atxn1P54254 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Atxn1P54254 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atxn1P54254 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Atxn1P54254 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.46□□□□□ -0.42
Atxn1P54254 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.45□□□□□ -0.42
Atxn1P54254 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Atxn1P54254 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.45□□□□□ -0.42
Atxn1P54254 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.45□□□□□ -0.42
Atxn1P54254 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.45□□□□□ -0.42
Atxn1P54254 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.45□□□□□ -0.42
Atxn1P54254 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.45□□□□□ -0.42
Atxn1P54254 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.45□□□□□ -0.42
Atxn1P54254 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.45□□□□□ -0.42
Atxn1P54254 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.45□□□□□ -0.42
Atxn1P54254 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.45□□□□□ -0.42
Atxn1P54254 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Atxn1P54254 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Atxn1P54254 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Atxn1P54254 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Atxn1P54254 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atxn1P54254 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atxn1P54254 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.44□□□□□ -0.42
Atxn1P54254 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Atxn1P54254 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.44□□□□□ -0.42
Atxn1P54254 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atxn1P54254 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atxn1P54254 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.44□□□□□ -0.42
Atxn1P54254 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Atxn1P54254 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atxn1P54254 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.44□□□□□ -0.42
Atxn1P54254 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.44□□□□□ -0.42
Atxn1P54254 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atxn1P54254 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.44□□□□□ -0.42
Atxn1P54254 Gm8365-201ENSMUST00000197334 648 ntBASIC12.44□□□□□ -0.42
Atxn1P54254 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.44□□□□□ -0.42
Atxn1P54254 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.44□□□□□ -0.42
Atxn1P54254 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atxn1P54254 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atxn1P54254 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Atxn1P54254 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Atxn1P54254 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atxn1P54254 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atxn1P54254 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.44□□□□□ -0.42
Atxn1P54254 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atxn1P54254 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atxn1P54254 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms