Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pdx1P52946 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pdx1P52946 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Gm15370-201ENSMUST00000117158 253 ntBASIC12.37□□□□□ -0.43
Pdx1P52946 Gm4986-201ENSMUST00000119731 549 ntBASIC12.37□□□□□ -0.43
Pdx1P52946 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.37□□□□□ -0.43
Pdx1P52946 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pdx1P52946 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.37□□□□□ -0.43
Pdx1P52946 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.37□□□□□ -0.43
Pdx1P52946 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.37□□□□□ -0.43
Pdx1P52946 Gm27516-201ENSMUST00000184237 98 ntBASIC12.37□□□□□ -0.43
Pdx1P52946 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.37□□□□□ -0.43
Pdx1P52946 Gm7046-201ENSMUST00000221351 977 ntBASIC12.37□□□□□ -0.43
Pdx1P52946 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Gm8227-201ENSMUST00000223306 571 ntBASIC12.37□□□□□ -0.43
Pdx1P52946 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.37□□□□□ -0.43
Pdx1P52946 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.37□□□□□ -0.43
Pdx1P52946 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.37□□□□□ -0.43
Pdx1P52946 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pdx1P52946 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.37□□□□□ -0.43
Pdx1P52946 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.37□□□□□ -0.43
Pdx1P52946 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pdx1P52946 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pdx1P52946 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.37□□□□□ -0.43
Pdx1P52946 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.37□□□□□ -0.43
Pdx1P52946 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdx1P52946 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.37□□□□□ -0.43
Pdx1P52946 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pdx1P52946 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pdx1P52946 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.36□□□□□ -0.43
Pdx1P52946 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pdx1P52946 Gm10434-201ENSMUST00000101158 471 ntBASIC12.36□□□□□ -0.43
Pdx1P52946 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.36□□□□□ -0.43
Pdx1P52946 Gm2546-201ENSMUST00000182630 991 ntBASIC12.36□□□□□ -0.43
Pdx1P52946 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.36□□□□□ -0.43
Pdx1P52946 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.36□□□□□ -0.43
Pdx1P52946 Mir8109-201ENSMUST00000184375 117 ntBASIC12.36□□□□□ -0.43
Pdx1P52946 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.36□□□□□ -0.43
Pdx1P52946 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.36□□□□□ -0.43
Pdx1P52946 Gm18935-201ENSMUST00000212692 664 ntBASIC12.36□□□□□ -0.43
Pdx1P52946 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.36□□□□□ -0.43
Pdx1P52946 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.36□□□□□ -0.43
Pdx1P52946 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Gm9899-201ENSMUST00000065519 555 ntBASIC12.36□□□□□ -0.43
Pdx1P52946 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pdx1P52946 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pdx1P52946 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdx1P52946 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pdx1P52946 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pdx1P52946 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pdx1P52946 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Gm12314-201ENSMUST00000118104 538 ntBASIC12.35□□□□□ -0.43
Pdx1P52946 Gm12058-201ENSMUST00000118614 437 ntBASIC12.35□□□□□ -0.43
Pdx1P52946 Gm13297-201ENSMUST00000120205 934 ntBASIC12.35□□□□□ -0.43
Pdx1P52946 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.35□□□□□ -0.43
Pdx1P52946 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Pdx1P52946 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.35□□□□□ -0.43
Pdx1P52946 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms