Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.89□□□□□ -0.51
RoraP51448 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
RoraP51448 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
RoraP51448 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
RoraP51448 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
RoraP51448 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.88□□□□□ -0.51
RoraP51448 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.88□□□□□ -0.51
RoraP51448 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
RoraP51448 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
RoraP51448 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
RoraP51448 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Gm11930-201ENSMUST00000117788 190 ntBASIC11.88□□□□□ -0.51
RoraP51448 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Gm25043-201ENSMUST00000158604 212 ntBASIC11.88□□□□□ -0.51
RoraP51448 Gm2383-201ENSMUST00000181461 807 ntBASIC11.88□□□□□ -0.51
RoraP51448 Gm38317-201ENSMUST00000195564 343 ntBASIC11.88□□□□□ -0.51
RoraP51448 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.88□□□□□ -0.51
RoraP51448 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.88□□□□□ -0.51
RoraP51448 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.88□□□□□ -0.51
RoraP51448 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.88□□□□□ -0.51
RoraP51448 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Mir433-201ENSMUST00000093564 124 ntBASIC11.88□□□□□ -0.51
RoraP51448 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
RoraP51448 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.88□□□□□ -0.51
RoraP51448 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RoraP51448 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.87□□□□□ -0.51
RoraP51448 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RoraP51448 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.87□□□□□ -0.51
RoraP51448 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RoraP51448 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
RoraP51448 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.87□□□□□ -0.51
RoraP51448 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.87□□□□□ -0.51
RoraP51448 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.87□□□□□ -0.51
RoraP51448 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RoraP51448 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.87□□□□□ -0.51
RoraP51448 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.87□□□□□ -0.51
RoraP51448 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.87□□□□□ -0.51
RoraP51448 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.87□□□□□ -0.51
RoraP51448 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
RoraP51448 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RoraP51448 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms