Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpbP50405 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpbP50405 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.8□□□□□ -0.36
SftpbP50405 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.8□□□□□ -0.36
SftpbP50405 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.8□□□□□ -0.36
SftpbP50405 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
SftpbP50405 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpbP50405 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SftpbP50405 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SftpbP50405 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SftpbP50405 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpbP50405 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpbP50405 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SftpbP50405 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SftpbP50405 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpbP50405 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
SftpbP50405 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SftpbP50405 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
SftpbP50405 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpbP50405 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SftpbP50405 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SftpbP50405 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
SftpbP50405 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SftpbP50405 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
SftpbP50405 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
SftpbP50405 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.79□□□□□ -0.36
SftpbP50405 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.79□□□□□ -0.36
SftpbP50405 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.79□□□□□ -0.36
SftpbP50405 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.79□□□□□ -0.36
SftpbP50405 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SftpbP50405 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SftpbP50405 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SftpbP50405 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.79□□□□□ -0.36
SftpbP50405 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.79□□□□□ -0.36
SftpbP50405 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SftpbP50405 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SftpbP50405 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SftpbP50405 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
SftpbP50405 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SftpbP50405 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.78□□□□□ -0.36
SftpbP50405 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Gm6244-201ENSMUST00000178732 841 ntBASIC12.78□□□□□ -0.36
SftpbP50405 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.78□□□□□ -0.36
SftpbP50405 Gm19184-201ENSMUST00000196798 928 ntBASIC12.78□□□□□ -0.36
SftpbP50405 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.78□□□□□ -0.36
SftpbP50405 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Gm5356-201ENSMUST00000093326 615 ntBASIC12.78□□□□□ -0.36
SftpbP50405 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.78□□□□□ -0.36
SftpbP50405 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SftpbP50405 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.78□□□□□ -0.36
SftpbP50405 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms