Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm15036-201ENSMUST00000118880 400 ntBASIC13.79□□□□□ -0.2
Brca1P48754 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Brca1P48754 Gm18367-201ENSMUST00000176139 600 ntBASIC13.79□□□□□ -0.2
Brca1P48754 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC13.79□□□□□ -0.2
Brca1P48754 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC13.79□□□□□ -0.2
Brca1P48754 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.79□□□□□ -0.2
Brca1P48754 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.79□□□□□ -0.2
Brca1P48754 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.79□□□□□ -0.2
Brca1P48754 Gm8894-201ENSMUST00000074642 666 ntBASIC13.79□□□□□ -0.2
Brca1P48754 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Brca1P48754 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Brca1P48754 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.79□□□□□ -0.2
Brca1P48754 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.79□□□□□ -0.2
Brca1P48754 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.79□□□□□ -0.2
Brca1P48754 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Brca1P48754 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.79□□□□□ -0.2
Brca1P48754 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Brca1P48754 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Brca1P48754 Gm8815-201ENSMUST00000173809 620 ntBASIC13.78□□□□□ -0.2
Brca1P48754 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.78□□□□□ -0.2
Brca1P48754 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.78□□□□□ -0.2
Brca1P48754 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Brca1P48754 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Brca1P48754 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Brca1P48754 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Brca1P48754 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.78□□□□□ -0.2
Brca1P48754 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.78□□□□□ -0.2
Brca1P48754 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.78□□□□□ -0.2
Brca1P48754 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Brca1P48754 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.78□□□□□ -0.2
Brca1P48754 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.78□□□□□ -0.2
Brca1P48754 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.78□□□□□ -0.2
Brca1P48754 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.78□□□□□ -0.2
Brca1P48754 Gm3318-201ENSMUST00000217604 1183 ntBASIC13.78□□□□□ -0.2
Brca1P48754 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Brca1P48754 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brca1P48754 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Brca1P48754 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Brca1P48754 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Brca1P48754 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Brca1P48754 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Brca1P48754 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Brca1P48754 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Brca1P48754 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Brca1P48754 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Brca1P48754 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Brca1P48754 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Brca1P48754 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.77□□□□□ -0.2
Brca1P48754 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
Brca1P48754 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brca1P48754 Gm11949-201ENSMUST00000117640 372 ntBASIC13.77□□□□□ -0.21
Brca1P48754 Gm12218-201ENSMUST00000117666 399 ntBASIC13.77□□□□□ -0.21
Brca1P48754 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.77□□□□□ -0.21
Brca1P48754 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Brca1P48754 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brca1P48754 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Brca1P48754 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brca1P48754 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Brca1P48754 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brca1P48754 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Brca1P48754 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brca1P48754 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.77□□□□□ -0.21
Brca1P48754 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms