Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Vps4bP46467 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vps4bP46467 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.71□□□□□ -0.37
Vps4bP46467 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Gm12384-201ENSMUST00000119228 919 ntBASIC12.71□□□□□ -0.37
Vps4bP46467 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Gm4271-201ENSMUST00000174444 973 ntBASIC12.71□□□□□ -0.37
Vps4bP46467 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.71□□□□□ -0.37
Vps4bP46467 Gm27331-201ENSMUST00000183705 60 ntBASIC12.71□□□□□ -0.37
Vps4bP46467 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Gm42693-201ENSMUST00000196779 631 ntBASIC12.71□□□□□ -0.37
Vps4bP46467 Gm29705-201ENSMUST00000212598 474 ntBASIC12.71□□□□□ -0.37
Vps4bP46467 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.71□□□□□ -0.37
Vps4bP46467 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.71□□□□□ -0.37
Vps4bP46467 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.71□□□□□ -0.37
Vps4bP46467 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.71□□□□□ -0.37
Vps4bP46467 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.71□□□□□ -0.38
Vps4bP46467 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vps4bP46467 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Vps4bP46467 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vps4bP46467 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Vps4bP46467 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vps4bP46467 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vps4bP46467 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Vps4bP46467 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vps4bP46467 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.7□□□□□ -0.38
Vps4bP46467 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Vps4bP46467 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vps4bP46467 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.7□□□□□ -0.38
Vps4bP46467 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.7□□□□□ -0.38
Vps4bP46467 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.7□□□□□ -0.38
Vps4bP46467 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Gm24644-201ENSMUST00000157114 139 ntBASIC12.7□□□□□ -0.38
Vps4bP46467 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Vps4bP46467 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.7□□□□□ -0.38
Vps4bP46467 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.7□□□□□ -0.38
Vps4bP46467 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.7□□□□□ -0.38
Vps4bP46467 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.7□□□□□ -0.38
Vps4bP46467 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vps4bP46467 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Vps4bP46467 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps4bP46467 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Vps4bP46467 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Vps4bP46467 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.69□□□□□ -0.38
Vps4bP46467 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Vps4bP46467 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.69□□□□□ -0.38
Vps4bP46467 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Mir1247-201ENSMUST00000116706 82 ntBASIC12.69□□□□□ -0.38
Vps4bP46467 Gm13392-201ENSMUST00000117708 150 ntBASIC12.69□□□□□ -0.38
Vps4bP46467 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Vps4bP46467 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.69□□□□□ -0.38
Vps4bP46467 Gm8062-201ENSMUST00000139696 444 ntBASIC12.69□□□□□ -0.38
Vps4bP46467 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.69□□□□□ -0.38
Vps4bP46467 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Snora78-201ENSMUST00000158630 128 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms