Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Sox18P43680 Gm11340-201ENSMUST00000119226 412 ntBASIC12.14□□□□□ -0.47
Sox18P43680 Gm11450-201ENSMUST00000121144 333 ntBASIC12.14□□□□□ -0.47
Sox18P43680 Gm14460-201ENSMUST00000121511 639 ntBASIC12.14□□□□□ -0.47
Sox18P43680 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox18P43680 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.14□□□□□ -0.47
Sox18P43680 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC12.14□□□□□ -0.47
Sox18P43680 Gm43916-201ENSMUST00000205062 967 ntBASIC12.14□□□□□ -0.47
Sox18P43680 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC12.14□□□□□ -0.47
Sox18P43680 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox18P43680 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sox18P43680 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.14□□□□□ -0.47
Sox18P43680 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Sox18P43680 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sox18P43680 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox18P43680 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox18P43680 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Sox18P43680 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.13□□□□□ -0.47
Sox18P43680 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.13□□□□□ -0.47
Sox18P43680 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sox18P43680 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.13□□□□□ -0.47
Sox18P43680 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.13□□□□□ -0.47
Sox18P43680 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.13□□□□□ -0.47
Sox18P43680 Gm14704-201ENSMUST00000120300 874 ntBASIC12.13□□□□□ -0.47
Sox18P43680 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.13□□□□□ -0.47
Sox18P43680 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.13□□□□□ -0.47
Sox18P43680 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox18P43680 Gm6963-201ENSMUST00000147879 379 ntBASIC12.13□□□□□ -0.47
Sox18P43680 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC12.13□□□□□ -0.47
Sox18P43680 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox18P43680 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sox18P43680 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox18P43680 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox18P43680 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox18P43680 Gm38210-201ENSMUST00000191944 809 ntBASIC12.13□□□□□ -0.47
Sox18P43680 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.13□□□□□ -0.47
Sox18P43680 Gm21190-202ENSMUST00000196384 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sox18P43680 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Gm45151-201ENSMUST00000205445 712 ntTSL 2 BASIC12.13□□□□□ -0.47
Sox18P43680 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Sox18P43680 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Sox18P43680 AC153968.2-201ENSMUST00000215579 1140 ntBASIC12.13□□□□□ -0.47
Sox18P43680 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.13□□□□□ -0.47
Sox18P43680 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox18P43680 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sox18P43680 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.13□□□□□ -0.47
Sox18P43680 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sox18P43680 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox18P43680 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms