Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-2P42586 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.46□□□□□ -0.57
Nkx2-2P42586 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Gm13392-201ENSMUST00000117708 150 ntBASIC11.46□□□□□ -0.57
Nkx2-2P42586 Gm14999-201ENSMUST00000121039 624 ntBASIC11.46□□□□□ -0.57
Nkx2-2P42586 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Gm27572-201ENSMUST00000183702 255 ntBASIC11.46□□□□□ -0.57
Nkx2-2P42586 Gm44958-201ENSMUST00000203734 736 ntBASIC11.46□□□□□ -0.57
Nkx2-2P42586 Gm44882-201ENSMUST00000205702 802 ntBASIC11.46□□□□□ -0.57
Nkx2-2P42586 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.46□□□□□ -0.57
Nkx2-2P42586 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Gm9823-201ENSMUST00000051212 327 ntBASIC11.46□□□□□ -0.57
Nkx2-2P42586 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.46□□□□□ -0.57
Nkx2-2P42586 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-2P42586 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-2P42586 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-2P42586 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Nkx2-2P42586 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-2P42586 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-2P42586 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-2P42586 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-2P42586 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-2P42586 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Nkx2-2P42586 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-2P42586 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-2P42586 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.45□□□□□ -0.58
Nkx2-2P42586 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Nkx2-2P42586 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.45□□□□□ -0.58
Nkx2-2P42586 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Gm13570-201ENSMUST00000140763 309 ntBASIC11.45□□□□□ -0.58
Nkx2-2P42586 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Nkx2-2P42586 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.45□□□□□ -0.58
Nkx2-2P42586 Gm2546-201ENSMUST00000182630 991 ntBASIC11.45□□□□□ -0.58
Nkx2-2P42586 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.45□□□□□ -0.58
Nkx2-2P42586 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Gm7046-201ENSMUST00000221351 977 ntBASIC11.45□□□□□ -0.58
Nkx2-2P42586 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Gm10478-201ENSMUST00000084451 396 ntBASIC11.45□□□□□ -0.58
Nkx2-2P42586 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.45□□□□□ -0.58
Nkx2-2P42586 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.45□□□□□ -0.58
Nkx2-2P42586 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-2P42586 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkx2-2P42586 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-2P42586 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms