Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox5P35710 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox5P35710 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox5P35710 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox5P35710 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox5P35710 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox5P35710 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox5P35710 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sox5P35710 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox5P35710 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox5P35710 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.64□□□□□ -0.23
Sox5P35710 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox5P35710 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox5P35710 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Sox5P35710 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sox5P35710 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox5P35710 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.64□□□□□ -0.23
Sox5P35710 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.64□□□□□ -0.23
Sox5P35710 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.64□□□□□ -0.23
Sox5P35710 Gm4768-201ENSMUST00000206199 686 ntBASIC13.64□□□□□ -0.23
Sox5P35710 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.64□□□□□ -0.23
Sox5P35710 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.64□□□□□ -0.23
Sox5P35710 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox5P35710 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sox5P35710 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sox5P35710 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.64□□□□□ -0.23
Sox5P35710 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sox5P35710 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sox5P35710 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Sox5P35710 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sox5P35710 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox5P35710 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.64□□□□□ -0.23
Sox5P35710 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Sox5P35710 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Sox5P35710 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.63□□□□□ -0.23
Sox5P35710 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.63□□□□□ -0.23
Sox5P35710 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Gm23984-201ENSMUST00000157139 203 ntBASIC13.63□□□□□ -0.23
Sox5P35710 Rmrp-201ENSMUST00000157463 271 ntBASIC13.63□□□□□ -0.23
Sox5P35710 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sox5P35710 Auts2-212ENSMUST00000178555 309 ntBASIC13.63□□□□□ -0.23
Sox5P35710 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.63□□□□□ -0.23
Sox5P35710 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Gm24526-201ENSMUST00000082921 158 ntBASIC13.63□□□□□ -0.23
Sox5P35710 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Sox5P35710 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.63□□□□□ -0.23
Sox5P35710 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Sox5P35710 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox5P35710 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.62□□□□□ -0.23
Sox5P35710 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox5P35710 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox5P35710 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox5P35710 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox5P35710 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox5P35710 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox5P35710 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox5P35710 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms