Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a11P31650 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.91□□□□□ -0.5
Slc6a11P31650 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.91□□□□□ -0.5
Slc6a11P31650 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Slc6a11P31650 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a11P31650 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.91□□□□□ -0.5
Slc6a11P31650 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a11P31650 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a11P31650 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.91□□□□□ -0.5
Slc6a11P31650 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.91□□□□□ -0.5
Slc6a11P31650 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a11P31650 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a11P31650 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.9□□□□□ -0.5
Slc6a11P31650 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Slc6a11P31650 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.9□□□□□ -0.5
Slc6a11P31650 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Gm7584-201ENSMUST00000175829 940 ntBASIC11.9□□□□□ -0.5
Slc6a11P31650 Gm28693-202ENSMUST00000190758 331 ntBASIC11.9□□□□□ -0.5
Slc6a11P31650 Gm38002-201ENSMUST00000193255 180 ntBASIC11.9□□□□□ -0.5
Slc6a11P31650 Gm42627-201ENSMUST00000197347 224 ntBASIC11.9□□□□□ -0.5
Slc6a11P31650 Gm44487-201ENSMUST00000205145 325 ntBASIC11.9□□□□□ -0.5
Slc6a11P31650 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Slc6a11P31650 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a11P31650 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.9□□□□□ -0.5
Slc6a11P31650 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.9□□□□□ -0.5
Slc6a11P31650 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.9□□□□□ -0.51
Slc6a11P31650 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Slc6a11P31650 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.89□□□□□ -0.51
Slc6a11P31650 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Slc6a11P31650 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.89□□□□□ -0.51
Slc6a11P31650 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.89□□□□□ -0.51
Slc6a11P31650 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Slc6a11P31650 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Slc6a11P31650 Gm6152-201ENSMUST00000151704 340 ntBASIC11.89□□□□□ -0.51
Slc6a11P31650 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.89□□□□□ -0.51
Slc6a11P31650 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.89□□□□□ -0.51
Slc6a11P31650 Gm9630-201ENSMUST00000178304 885 ntBASIC11.89□□□□□ -0.51
Slc6a11P31650 Gm37466-201ENSMUST00000195692 652 ntBASIC11.89□□□□□ -0.51
Slc6a11P31650 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.89□□□□□ -0.51
Slc6a11P31650 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.89□□□□□ -0.51
Slc6a11P31650 Gm7783-201ENSMUST00000204795 781 ntBASIC11.89□□□□□ -0.51
Slc6a11P31650 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Gm29705-201ENSMUST00000212598 474 ntBASIC11.89□□□□□ -0.51
Slc6a11P31650 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Slc6a11P31650 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Slc6a11P31650 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.89□□□□□ -0.51
Slc6a11P31650 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Slc6a11P31650 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.89□□□□□ -0.51
Slc6a11P31650 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a11P31650 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.88□□□□□ -0.51
Slc6a11P31650 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a11P31650 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a11P31650 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Slc6a11P31650 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a11P31650 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a11P31650 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a11P31650 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a11P31650 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a11P31650 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms