Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RxrbP28704 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RxrbP28704 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RxrbP28704 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RxrbP28704 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RxrbP28704 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.56□□□□□ -0.4
RxrbP28704 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RxrbP28704 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RxrbP28704 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RxrbP28704 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RxrbP28704 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RxrbP28704 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RxrbP28704 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.56□□□□□ -0.4
RxrbP28704 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RxrbP28704 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.55□□□□□ -0.4
RxrbP28704 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RxrbP28704 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.55□□□□□ -0.4
RxrbP28704 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Gm16202-201ENSMUST00000117532 544 ntBASIC12.55□□□□□ -0.4
RxrbP28704 Gm6152-201ENSMUST00000151704 340 ntBASIC12.55□□□□□ -0.4
RxrbP28704 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RxrbP28704 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.55□□□□□ -0.4
RxrbP28704 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Gm27437-201ENSMUST00000183429 107 ntBASIC12.55□□□□□ -0.4
RxrbP28704 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.55□□□□□ -0.4
RxrbP28704 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.55□□□□□ -0.4
RxrbP28704 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.55□□□□□ -0.4
RxrbP28704 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.55□□□□□ -0.4
RxrbP28704 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
RxrbP28704 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RxrbP28704 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RxrbP28704 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RxrbP28704 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RxrbP28704 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
RxrbP28704 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.54□□□□□ -0.4
RxrbP28704 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
RxrbP28704 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.54□□□□□ -0.4
RxrbP28704 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
RxrbP28704 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
RxrbP28704 Gm12859-201ENSMUST00000117834 427 ntBASIC12.54□□□□□ -0.4
RxrbP28704 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RxrbP28704 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.54□□□□□ -0.4
RxrbP28704 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
RxrbP28704 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RxrbP28704 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.54□□□□□ -0.4
RxrbP28704 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.54□□□□□ -0.4
RxrbP28704 Gm6458-201ENSMUST00000211573 635 ntBASIC12.54□□□□□ -0.4
RxrbP28704 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RxrbP28704 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RxrbP28704 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RxrbP28704 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.53□□□□□ -0.4
RxrbP28704 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms