Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm13296-201ENSMUST00000117854 997 ntBASIC12.49□□□□□ -0.41
Nckap1P28660 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.49□□□□□ -0.41
Nckap1P28660 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nckap1P28660 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nckap1P28660 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Nckap1P28660 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nckap1P28660 Gm27341-201ENSMUST00000183570 106 ntBASIC12.49□□□□□ -0.41
Nckap1P28660 Gm28882-201ENSMUST00000185504 314 ntBASIC12.49□□□□□ -0.41
Nckap1P28660 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.49□□□□□ -0.41
Nckap1P28660 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nckap1P28660 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nckap1P28660 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nckap1P28660 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nckap1P28660 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nckap1P28660 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Nckap1P28660 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nckap1P28660 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Nckap1P28660 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.49□□□□□ -0.41
Nckap1P28660 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nckap1P28660 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nckap1P28660 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nckap1P28660 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nckap1P28660 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nckap1P28660 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nckap1P28660 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.48□□□□□ -0.41
Nckap1P28660 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.48□□□□□ -0.41
Nckap1P28660 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Nckap1P28660 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.48□□□□□ -0.41
Nckap1P28660 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Nckap1P28660 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nckap1P28660 Gm13315-201ENSMUST00000120376 991 ntBASIC12.48□□□□□ -0.41
Nckap1P28660 Rmrp-201ENSMUST00000157463 271 ntBASIC12.48□□□□□ -0.41
Nckap1P28660 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.48□□□□□ -0.41
Nckap1P28660 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.48□□□□□ -0.41
Nckap1P28660 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nckap1P28660 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Gm44262-201ENSMUST00000204969 372 ntBASIC12.48□□□□□ -0.41
Nckap1P28660 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.48□□□□□ -0.41
Nckap1P28660 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.48□□□□□ -0.41
Nckap1P28660 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nckap1P28660 Gm8385-201ENSMUST00000058999 643 ntBASIC12.48□□□□□ -0.41
Nckap1P28660 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Nckap1P28660 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.48□□□□□ -0.41
Nckap1P28660 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nckap1P28660 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.48□□□□□ -0.41
Nckap1P28660 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nckap1P28660 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nckap1P28660 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Nckap1P28660 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.47□□□□□ -0.41
Nckap1P28660 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nckap1P28660 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.47□□□□□ -0.41
Nckap1P28660 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.47□□□□□ -0.41
Nckap1P28660 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Nckap1P28660 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Nckap1P28660 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.47□□□□□ -0.41
Nckap1P28660 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nckap1P28660 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Rprl1-202ENSMUST00000198476 238 ntBASIC12.47□□□□□ -0.41
Nckap1P28660 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.47□□□□□ -0.41
Nckap1P28660 Gzmn-202ENSMUST00000225535 989 ntBASIC12.47□□□□□ -0.41
Nckap1P28660 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.47□□□□□ -0.41
Nckap1P28660 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nckap1P28660 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms