Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Gjb1P28230 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Gjb1P28230 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.93□□□□□ -0.18
Gjb1P28230 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Gjb1P28230 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Gjb1P28230 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Gm13809-201ENSMUST00000117921 597 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 Gm12899-201ENSMUST00000120565 551 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 Gm25545-201ENSMUST00000122673 323 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 Gm4726-201ENSMUST00000135604 736 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.93□□□□□ -0.18
Gjb1P28230 Gm6019-201ENSMUST00000148369 736 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 Gm22877-201ENSMUST00000175451 105 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Gjb1P28230 Gm23771-201ENSMUST00000178702 110 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Gm5621-201ENSMUST00000187303 640 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.93□□□□□ -0.18
Gjb1P28230 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.93□□□□□ -0.18
Gjb1P28230 Gm807-202ENSMUST00000224929 408 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Gjb1P28230 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Gm26448-201ENSMUST00000082446 203 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Gjb1P28230 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.93□□□□□ -0.18
Gjb1P28230 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Gjb1P28230 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gjb1P28230 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.92□□□□□ -0.18
Gjb1P28230 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gjb1P28230 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Gjb1P28230 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gjb1P28230 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.92□□□□□ -0.18
Gjb1P28230 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gjb1P28230 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Gjb1P28230 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
Gjb1P28230 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gjb1P28230 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gjb1P28230 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.92□□□□□ -0.18
Gjb1P28230 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.92□□□□□ -0.18
Gjb1P28230 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gjb1P28230 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.92□□□□□ -0.18
Gjb1P28230 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.92□□□□□ -0.18
Gjb1P28230 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gjb1P28230 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gjb1P28230 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.92□□□□□ -0.18
Gjb1P28230 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gjb1P28230 Gm27910-201ENSMUST00000185004 107 ntBASIC13.92□□□□□ -0.18
Gjb1P28230 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Gjb1P28230 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gjb1P28230 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.92□□□□□ -0.18
Gjb1P28230 Gm5298-201ENSMUST00000201122 892 ntBASIC13.92□□□□□ -0.18
Gjb1P28230 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gjb1P28230 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gjb1P28230 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.92□□□□□ -0.18
Gjb1P28230 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gjb1P28230 Gm9996-201ENSMUST00000070359 913 ntBASIC13.92□□□□□ -0.18
Gjb1P28230 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Gjb1P28230 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.92□□□□□ -0.18
Gjb1P28230 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gjb1P28230 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Gjb1P28230 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Gjb1P28230 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gjb1P28230 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gjb1P28230 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gjb1P28230 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gjb1P28230 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.91□□□□□ -0.18
Gjb1P28230 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gjb1P28230 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gjb1P28230 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Gjb1P28230 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Gjb1P28230 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gjb1P28230 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gjb1P28230 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gjb1P28230 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.91□□□□□ -0.18
Gjb1P28230 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms