Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.59□□□□□ -0.55
Cd40lgP27548 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.59□□□□□ -0.55
Cd40lgP27548 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Gm5187-201ENSMUST00000117317 991 ntBASIC11.59□□□□□ -0.55
Cd40lgP27548 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.59□□□□□ -0.55
Cd40lgP27548 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.59□□□□□ -0.55
Cd40lgP27548 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.59□□□□□ -0.55
Cd40lgP27548 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.59□□□□□ -0.55
Cd40lgP27548 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.59□□□□□ -0.55
Cd40lgP27548 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.59□□□□□ -0.55
Cd40lgP27548 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.59□□□□□ -0.55
Cd40lgP27548 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.59□□□□□ -0.55
Cd40lgP27548 Gm5904-201ENSMUST00000210286 865 ntBASIC11.59□□□□□ -0.55
Cd40lgP27548 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.59□□□□□ -0.55
Cd40lgP27548 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.59□□□□□ -0.55
Cd40lgP27548 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.59□□□□□ -0.55
Cd40lgP27548 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.59□□□□□ -0.55
Cd40lgP27548 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cd40lgP27548 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.59□□□□□ -0.55
Cd40lgP27548 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.59□□□□□ -0.55
Cd40lgP27548 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.59□□□□□ -0.55
Cd40lgP27548 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cd40lgP27548 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cd40lgP27548 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.58□□□□□ -0.55
Cd40lgP27548 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Cd40lgP27548 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cd40lgP27548 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cd40lgP27548 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.58□□□□□ -0.56
Cd40lgP27548 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.58□□□□□ -0.56
Cd40lgP27548 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.58□□□□□ -0.56
Cd40lgP27548 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.58□□□□□ -0.56
Cd40lgP27548 Gm7029-201ENSMUST00000173226 450 ntBASIC11.58□□□□□ -0.56
Cd40lgP27548 Gm23363-201ENSMUST00000175024 79 ntBASIC11.58□□□□□ -0.56
Cd40lgP27548 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.58□□□□□ -0.56
Cd40lgP27548 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.58□□□□□ -0.56
Cd40lgP27548 Gm18584-201ENSMUST00000203098 964 ntBASIC11.58□□□□□ -0.56
Cd40lgP27548 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.58□□□□□ -0.56
Cd40lgP27548 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Cd40lgP27548 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.58□□□□□ -0.56
Cd40lgP27548 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cd40lgP27548 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.58□□□□□ -0.56
Cd40lgP27548 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cd40lgP27548 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.58□□□□□ -0.56
Cd40lgP27548 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cd40lgP27548 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Cd40lgP27548 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cd40lgP27548 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd40lgP27548 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cd40lgP27548 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Cd40lgP27548 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms