Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Pde6bP23440 Gm4909-201ENSMUST00000118749 794 ntBASIC13.71□□□□□ -0.21
Pde6bP23440 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.71□□□□□ -0.21
Pde6bP23440 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pde6bP23440 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pde6bP23440 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pde6bP23440 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.71□□□□□ -0.21
Pde6bP23440 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.71□□□□□ -0.21
Pde6bP23440 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pde6bP23440 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pde6bP23440 Mir339-201ENSMUST00000083659 96 ntBASIC13.71□□□□□ -0.21
Pde6bP23440 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.71□□□□□ -0.21
Pde6bP23440 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pde6bP23440 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pde6bP23440 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pde6bP23440 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pde6bP23440 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.71□□□□□ -0.21
Pde6bP23440 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pde6bP23440 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.71□□□□□ -0.22
Pde6bP23440 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.71□□□□□ -0.22
Pde6bP23440 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pde6bP23440 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pde6bP23440 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pde6bP23440 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Pde6bP23440 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
Pde6bP23440 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.7□□□□□ -0.22
Pde6bP23440 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.7□□□□□ -0.22
Pde6bP23440 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Pde6bP23440 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Pde6bP23440 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Pde6bP23440 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Gm13736-201ENSMUST00000119272 253 ntBASIC13.7□□□□□ -0.22
Pde6bP23440 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.7□□□□□ -0.22
Pde6bP23440 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.7□□□□□ -0.22
Pde6bP23440 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pde6bP23440 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.7□□□□□ -0.22
Pde6bP23440 Gm27023-201ENSMUST00000182372 285 ntBASIC13.7□□□□□ -0.22
Pde6bP23440 Gm8885-201ENSMUST00000189382 598 ntBASIC13.7□□□□□ -0.22
Pde6bP23440 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.7□□□□□ -0.22
Pde6bP23440 Gm8712-201ENSMUST00000221090 701 ntBASIC13.7□□□□□ -0.22
Pde6bP23440 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.7□□□□□ -0.22
Pde6bP23440 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.7□□□□□ -0.22
Pde6bP23440 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pde6bP23440 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6bP23440 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Pde6bP23440 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.69□□□□□ -0.22
Pde6bP23440 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pde6bP23440 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.69□□□□□ -0.22
Pde6bP23440 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Pde6bP23440 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.69□□□□□ -0.22
Pde6bP23440 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.69□□□□□ -0.22
Pde6bP23440 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.69□□□□□ -0.22
Pde6bP23440 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.69□□□□□ -0.22
Pde6bP23440 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.69□□□□□ -0.22
Pde6bP23440 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.69□□□□□ -0.22
Pde6bP23440 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Pde6bP23440 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.69□□□□□ -0.22
Pde6bP23440 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pde6bP23440 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms