Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Clk1P22518 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Clk1P22518 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Clk1P22518 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.76□□□□□ -0.53
Clk1P22518 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Gm26927-201ENSMUST00000182385 965 ntBASIC11.76□□□□□ -0.53
Clk1P22518 Gm27839-201ENSMUST00000184242 106 ntBASIC11.76□□□□□ -0.53
Clk1P22518 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.76□□□□□ -0.53
Clk1P22518 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.76□□□□□ -0.53
Clk1P22518 Gm29705-201ENSMUST00000212598 474 ntBASIC11.76□□□□□ -0.53
Clk1P22518 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.76□□□□□ -0.53
Clk1P22518 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.76□□□□□ -0.53
Clk1P22518 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Clk1P22518 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Clk1P22518 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Clk1P22518 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Clk1P22518 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Clk1P22518 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.76□□□□□ -0.53
Clk1P22518 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Clk1P22518 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Clk1P22518 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.75□□□□□ -0.53
Clk1P22518 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Clk1P22518 Gm17150-201ENSMUST00000165577 381 ntBASIC11.75□□□□□ -0.53
Clk1P22518 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.75□□□□□ -0.53
Clk1P22518 Gm8099-201ENSMUST00000200510 742 ntBASIC11.75□□□□□ -0.53
Clk1P22518 Gm4768-201ENSMUST00000206199 686 ntBASIC11.75□□□□□ -0.53
Clk1P22518 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Clk1P22518 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Gm6091-201ENSMUST00000098307 165 ntBASIC11.75□□□□□ -0.53
Clk1P22518 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 AC122881.1-201ENSMUST00000225757 2695 ntBASIC11.75□□□□□ -0.53
Clk1P22518 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Clk1P22518 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.75□□□□□ -0.53
Clk1P22518 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.75□□□□□ -0.53
Clk1P22518 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Clk1P22518 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Clk1P22518 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clk1P22518 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.74□□□□□ -0.53
Clk1P22518 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Clk1P22518 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms