Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb9P20615 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb9P20615 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb9P20615 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Hoxb9P20615 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb9P20615 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Hoxb9P20615 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb9P20615 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb9P20615 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb9P20615 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb9P20615 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.98□□□□□ -0.49
Hoxb9P20615 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb9P20615 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.97□□□□□ -0.49
Hoxb9P20615 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Hoxb9P20615 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hoxb9P20615 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hoxb9P20615 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Hoxb9P20615 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.97□□□□□ -0.49
Hoxb9P20615 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Hoxb9P20615 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxb9P20615 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Hoxb9P20615 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxb9P20615 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Hoxb9P20615 Gm12058-201ENSMUST00000118614 437 ntBASIC11.97□□□□□ -0.49
Hoxb9P20615 Gm8062-201ENSMUST00000139696 444 ntBASIC11.97□□□□□ -0.49
Hoxb9P20615 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.97□□□□□ -0.49
Hoxb9P20615 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.97□□□□□ -0.49
Hoxb9P20615 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.97□□□□□ -0.49
Hoxb9P20615 Gm6007-201ENSMUST00000208170 823 ntBASIC11.97□□□□□ -0.49
Hoxb9P20615 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hoxb9P20615 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Hoxb9P20615 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb9P20615 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxb9P20615 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.97□□□□□ -0.49
Hoxb9P20615 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Hoxb9P20615 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.96□□□□□ -0.49
Hoxb9P20615 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Hoxb9P20615 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.96□□□□□ -0.49
Hoxb9P20615 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Hoxb9P20615 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.96□□□□□ -0.49
Hoxb9P20615 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.96□□□□□ -0.49
Hoxb9P20615 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.96□□□□□ -0.49
Hoxb9P20615 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.96□□□□□ -0.49
Hoxb9P20615 Gm42937-201ENSMUST00000197360 752 ntBASIC11.96□□□□□ -0.49
Hoxb9P20615 Gm44882-201ENSMUST00000205702 802 ntBASIC11.96□□□□□ -0.49
Hoxb9P20615 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.96□□□□□ -0.49
Hoxb9P20615 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.96□□□□□ -0.49
Hoxb9P20615 Gm9823-201ENSMUST00000051212 327 ntBASIC11.96□□□□□ -0.49
Hoxb9P20615 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Hoxb9P20615 Gm10076-201ENSMUST00000073238 384 ntBASIC11.96□□□□□ -0.49
Hoxb9P20615 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb9P20615 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Hoxb9P20615 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms