Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hmgn1P18608 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn1P18608 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn1P18608 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn1P18608 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn1P18608 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Hmgn1P18608 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn1P18608 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn1P18608 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn1P18608 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.43□□□□□ -0.58
Hmgn1P18608 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn1P18608 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.42□□□□□ -0.58
Hmgn1P18608 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Hmgn1P18608 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.42□□□□□ -0.58
Hmgn1P18608 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Hmgn1P18608 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Hmgn1P18608 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.42□□□□□ -0.58
Hmgn1P18608 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Hmgn1P18608 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Gm12928-201ENSMUST00000117115 573 ntBASIC11.42□□□□□ -0.58
Hmgn1P18608 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.42□□□□□ -0.58
Hmgn1P18608 Gm17208-201ENSMUST00000168388 535 ntBASIC11.42□□□□□ -0.58
Hmgn1P18608 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.42□□□□□ -0.58
Hmgn1P18608 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Gm37042-201ENSMUST00000193816 581 ntBASIC11.42□□□□□ -0.58
Hmgn1P18608 Gm44872-201ENSMUST00000207864 420 ntBASIC11.42□□□□□ -0.58
Hmgn1P18608 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.42□□□□□ -0.58
Hmgn1P18608 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hmgn1P18608 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.42□□□□□ -0.58
Hmgn1P18608 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.42□□□□□ -0.58
Hmgn1P18608 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.42□□□□□ -0.58
Hmgn1P18608 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.42□□□□□ -0.58
Hmgn1P18608 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hmgn1P18608 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn1P18608 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.42□□□□□ -0.58
Hmgn1P18608 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Hmgn1P18608 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hmgn1P18608 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Hmgn1P18608 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hmgn1P18608 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Hmgn1P18608 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.41□□□□□ -0.58
Hmgn1P18608 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.41□□□□□ -0.58
Hmgn1P18608 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.41□□□□□ -0.58
Hmgn1P18608 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.41□□□□□ -0.58
Hmgn1P18608 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Gm2495-201ENSMUST00000191160 466 ntBASIC11.41□□□□□ -0.58
Hmgn1P18608 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.41□□□□□ -0.58
Hmgn1P18608 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.41□□□□□ -0.58
Hmgn1P18608 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.41□□□□□ -0.58
Hmgn1P18608 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.41□□□□□ -0.58
Hmgn1P18608 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.41□□□□□ -0.58
Hmgn1P18608 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Hmgn1P18608 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Hmgn1P18608 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn1P18608 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hmgn1P18608 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.41□□□□□ -0.58
Hmgn1P18608 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.41□□□□□ -0.58
Hmgn1P18608 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
Hmgn1P18608 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms