Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Kcna1P16388 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.2□□□□□ -0.14
Kcna1P16388 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Kcna1P16388 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Kcna1P16388 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Kcna1P16388 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Kcna1P16388 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Kcna1P16388 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Kcna1P16388 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Kcna1P16388 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Kcna1P16388 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Kcna1P16388 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Kcna1P16388 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Kcna1P16388 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Kcna1P16388 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Kcna1P16388 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Kcna1P16388 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Kcna1P16388 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Kcna1P16388 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Kcna1P16388 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.2□□□□□ -0.14
Kcna1P16388 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Kcna1P16388 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Kcna1P16388 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.19□□□□□ -0.14
Kcna1P16388 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Kcna1P16388 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Kcna1P16388 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Kcna1P16388 Gm9083-201ENSMUST00000120423 819 ntBASIC14.19□□□□□ -0.14
Kcna1P16388 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.19□□□□□ -0.14
Kcna1P16388 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Gm25116-201ENSMUST00000157191 122 ntBASIC14.19□□□□□ -0.14
Kcna1P16388 Gm26083-201ENSMUST00000157904 193 ntBASIC14.19□□□□□ -0.14
Kcna1P16388 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.19□□□□□ -0.14
Kcna1P16388 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Kcna1P16388 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Gm4857-201ENSMUST00000192718 785 ntBASIC14.19□□□□□ -0.14
Kcna1P16388 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.19□□□□□ -0.14
Kcna1P16388 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.19□□□□□ -0.14
Kcna1P16388 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Kcna1P16388 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Kcna1P16388 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Kcna1P16388 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcna1P16388 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.18□□□□□ -0.14
Kcna1P16388 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Kcna1P16388 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Kcna1P16388 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.18□□□□□ -0.14
Kcna1P16388 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Kcna1P16388 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Kcna1P16388 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.18□□□□□ -0.14
Kcna1P16388 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Kcna1P16388 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.18□□□□□ -0.14
Kcna1P16388 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Gm24136-201ENSMUST00000083374 165 ntBASIC14.18□□□□□ -0.14
Kcna1P16388 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Kcna1P16388 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.18□□□□□ -0.14
Kcna1P16388 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Kcna1P16388 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcna1P16388 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Kcna1P16388 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcna1P16388 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms