Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.9□□□□□ -0.66
UbbP0CG49 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
UbbP0CG49 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
UbbP0CG49 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
UbbP0CG49 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
UbbP0CG49 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
UbbP0CG49 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
UbbP0CG49 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
UbbP0CG49 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
UbbP0CG49 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
UbbP0CG49 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.89□□□□□ -0.67
UbbP0CG49 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
UbbP0CG49 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
UbbP0CG49 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
UbbP0CG49 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.89□□□□□ -0.67
UbbP0CG49 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.89□□□□□ -0.67
UbbP0CG49 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Gm16215-201ENSMUST00000161990 637 ntBASIC10.89□□□□□ -0.67
UbbP0CG49 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.89□□□□□ -0.67
UbbP0CG49 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.89□□□□□ -0.67
UbbP0CG49 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Gm8099-201ENSMUST00000200510 742 ntBASIC10.89□□□□□ -0.67
UbbP0CG49 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.89□□□□□ -0.67
UbbP0CG49 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.89□□□□□ -0.67
UbbP0CG49 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
UbbP0CG49 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.89□□□□□ -0.67
UbbP0CG49 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
UbbP0CG49 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
UbbP0CG49 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.89□□□□□ -0.67
UbbP0CG49 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
UbbP0CG49 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UbbP0CG49 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.88□□□□□ -0.67
UbbP0CG49 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
UbbP0CG49 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
UbbP0CG49 Gm11618-201ENSMUST00000117946 267 ntBASIC10.88□□□□□ -0.67
UbbP0CG49 Gm14057-201ENSMUST00000120631 482 ntBASIC10.88□□□□□ -0.67
UbbP0CG49 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.88□□□□□ -0.67
UbbP0CG49 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.88□□□□□ -0.67
UbbP0CG49 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
UbbP0CG49 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.88□□□□□ -0.67
UbbP0CG49 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
UbbP0CG49 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Gm7063-201ENSMUST00000186840 981 ntBASIC10.88□□□□□ -0.67
UbbP0CG49 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.88□□□□□ -0.67
UbbP0CG49 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.88□□□□□ -0.67
UbbP0CG49 Gm20949-201ENSMUST00000206478 952 ntBASIC10.88□□□□□ -0.67
UbbP0CG49 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.88□□□□□ -0.67
UbbP0CG49 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.88□□□□□ -0.67
UbbP0CG49 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
UbbP0CG49 Gm5867-201ENSMUST00000063197 592 ntBASIC10.88□□□□□ -0.67
UbbP0CG49 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.88□□□□□ -0.67
UbbP0CG49 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UbbP0CG49 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.88□□□□□ -0.67
UbbP0CG49 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
UbbP0CG49 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms