Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hoxc8P09025 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.23□□□□□ -0.29
Hoxc8P09025 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hoxc8P09025 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Hoxc8P09025 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.23□□□□□ -0.29
Hoxc8P09025 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.23□□□□□ -0.29
Hoxc8P09025 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hoxc8P09025 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Hoxc8P09025 Gm5419-201ENSMUST00000119301 527 ntBASIC13.23□□□□□ -0.29
Hoxc8P09025 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.23□□□□□ -0.29
Hoxc8P09025 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.23□□□□□ -0.29
Hoxc8P09025 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.23□□□□□ -0.29
Hoxc8P09025 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Gm9797-202ENSMUST00000218003 294 ntBASIC13.23□□□□□ -0.29
Hoxc8P09025 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.23□□□□□ -0.29
Hoxc8P09025 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Gm10288-201ENSMUST00000084614 537 ntBASIC13.23□□□□□ -0.29
Hoxc8P09025 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.23□□□□□ -0.29
Hoxc8P09025 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.22□□□□□ -0.29
Hoxc8P09025 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.22□□□□□ -0.29
Hoxc8P09025 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.22□□□□□ -0.29
Hoxc8P09025 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Hoxc8P09025 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Hoxc8P09025 Gm27438-201ENSMUST00000183480 110 ntBASIC13.22□□□□□ -0.29
Hoxc8P09025 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.22□□□□□ -0.29
Hoxc8P09025 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.22□□□□□ -0.29
Hoxc8P09025 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.22□□□□□ -0.29
Hoxc8P09025 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Hoxc8P09025 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Hoxc8P09025 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Hoxc8P09025 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.22□□□□□ -0.29
Hoxc8P09025 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Hoxc8P09025 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Hoxc8P09025 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Hoxc8P09025 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc8P09025 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Hoxc8P09025 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.21□□□□□ -0.29
Hoxc8P09025 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hoxc8P09025 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hoxc8P09025 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hoxc8P09025 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.21□□□□□ -0.29
Hoxc8P09025 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.21□□□□□ -0.29
Hoxc8P09025 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.21□□□□□ -0.29
Hoxc8P09025 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.21□□□□□ -0.29
Hoxc8P09025 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms