Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxa4P06798 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxa4P06798 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Hoxa4P06798 Gm13350-201ENSMUST00000120519 479 ntBASIC12.32□□□□□ -0.44
Hoxa4P06798 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxa4P06798 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Gm25668-201ENSMUST00000157700 129 ntBASIC12.32□□□□□ -0.44
Hoxa4P06798 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxa4P06798 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxa4P06798 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxa4P06798 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.32□□□□□ -0.44
Hoxa4P06798 Gm27320-201ENSMUST00000184892 109 ntBASIC12.32□□□□□ -0.44
Hoxa4P06798 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.32□□□□□ -0.44
Hoxa4P06798 Gm44882-201ENSMUST00000205702 802 ntBASIC12.32□□□□□ -0.44
Hoxa4P06798 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.32□□□□□ -0.44
Hoxa4P06798 Gm13097-201ENSMUST00000210722 397 ntBASIC12.32□□□□□ -0.44
Hoxa4P06798 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.32□□□□□ -0.44
Hoxa4P06798 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.32□□□□□ -0.44
Hoxa4P06798 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hoxa4P06798 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxa4P06798 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxa4P06798 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Hoxa4P06798 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxa4P06798 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxa4P06798 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.32□□□□□ -0.44
Hoxa4P06798 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hoxa4P06798 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hoxa4P06798 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hoxa4P06798 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.31□□□□□ -0.44
Hoxa4P06798 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hoxa4P06798 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Hoxa4P06798 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.31□□□□□ -0.44
Hoxa4P06798 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxa4P06798 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hoxa4P06798 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Hoxa4P06798 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Gm24934-201ENSMUST00000103764 111 ntBASIC12.31□□□□□ -0.44
Hoxa4P06798 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxa4P06798 Gm14644-201ENSMUST00000116671 647 ntBASIC12.31□□□□□ -0.44
Hoxa4P06798 Gm14109-201ENSMUST00000118814 309 ntBASIC12.31□□□□□ -0.44
Hoxa4P06798 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.31□□□□□ -0.44
Hoxa4P06798 Gm7584-201ENSMUST00000175829 940 ntBASIC12.31□□□□□ -0.44
Hoxa4P06798 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxa4P06798 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxa4P06798 Gm10312-201ENSMUST00000078515 489 ntBASIC12.31□□□□□ -0.44
Hoxa4P06798 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxa4P06798 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.31□□□□□ -0.44
Hoxa4P06798 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Hoxa4P06798 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxa4P06798 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.31□□□□□ -0.44
Hoxa4P06798 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxa4P06798 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa4P06798 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hoxa4P06798 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms