Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.93□□□□□ -0.34
PrnpP04925 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
PrnpP04925 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
PrnpP04925 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
PrnpP04925 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.93□□□□□ -0.34
PrnpP04925 Gm23251-201ENSMUST00000103773 110 ntBASIC12.93□□□□□ -0.34
PrnpP04925 Gm23596-201ENSMUST00000104304 132 ntBASIC12.93□□□□□ -0.34
PrnpP04925 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.93□□□□□ -0.34
PrnpP04925 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.93□□□□□ -0.34
PrnpP04925 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
PrnpP04925 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.93□□□□□ -0.34
PrnpP04925 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.93□□□□□ -0.34
PrnpP04925 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.93□□□□□ -0.34
PrnpP04925 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
PrnpP04925 Gm4482-201ENSMUST00000200876 742 ntBASIC12.93□□□□□ -0.34
PrnpP04925 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
PrnpP04925 Gm1821-202ENSMUST00000227415 750 ntBASIC12.93□□□□□ -0.34
PrnpP04925 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Gm26448-201ENSMUST00000082446 203 ntBASIC12.93□□□□□ -0.34
PrnpP04925 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
PrnpP04925 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.93□□□□□ -0.34
PrnpP04925 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrnpP04925 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.93□□□□□ -0.34
PrnpP04925 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.92□□□□□ -0.34
PrnpP04925 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
PrnpP04925 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
PrnpP04925 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
PrnpP04925 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.92□□□□□ -0.34
PrnpP04925 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.92□□□□□ -0.34
PrnpP04925 Gm10051-201ENSMUST00000145209 414 ntBASIC12.92□□□□□ -0.34
PrnpP04925 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
PrnpP04925 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Gm19459-201ENSMUST00000176240 835 ntBASIC12.92□□□□□ -0.34
PrnpP04925 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.92□□□□□ -0.34
PrnpP04925 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
PrnpP04925 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.92□□□□□ -0.34
PrnpP04925 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
PrnpP04925 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.92□□□□□ -0.34
PrnpP04925 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
PrnpP04925 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
PrnpP04925 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
PrnpP04925 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrnpP04925 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
PrnpP04925 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
PrnpP04925 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
PrnpP04925 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
PrnpP04925 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms