Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.01□□□□□ -0.65
P04224 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Gm13223-201ENSMUST00000118609 747 ntBASIC11.01□□□□□ -0.65
P04224 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
P04224 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.01□□□□□ -0.65
P04224 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.01□□□□□ -0.65
P04224 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.01□□□□□ -0.65
P04224 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
P04224 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.01□□□□□ -0.65
P04224 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
P04224 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.01□□□□□ -0.65
P04224 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Gm43174-201ENSMUST00000195914 2445 ntBASIC11□□□□□ -0.65
P04224 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11□□□□□ -0.65
P04224 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
P04224 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
P04224 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11□□□□□ -0.65
P04224 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11□□□□□ -0.65
P04224 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11□□□□□ -0.65
P04224 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11□□□□□ -0.65
P04224 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11□□□□□ -0.65
P04224 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11□□□□□ -0.65
P04224 Gm13616-201ENSMUST00000120600 222 ntBASIC11□□□□□ -0.65
P04224 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11□□□□□ -0.65
P04224 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11□□□□□ -0.65
P04224 Gm9522-201ENSMUST00000182394 926 ntBASIC11□□□□□ -0.65
P04224 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11□□□□□ -0.65
P04224 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11□□□□□ -0.65
P04224 Gm38144-201ENSMUST00000192790 465 ntBASIC11□□□□□ -0.65
P04224 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11□□□□□ -0.65
P04224 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
P04224 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11□□□□□ -0.65
P04224 Gm5161-201ENSMUST00000075243 853 ntBASIC11□□□□□ -0.65
P04224 Gm24447-201ENSMUST00000083977 338 ntBASIC11□□□□□ -0.65
P04224 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11□□□□□ -0.65
P04224 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
P04224 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11□□□□□ -0.65
P04224 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
P04224 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11□□□□□ -0.65
P04224 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04224 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.99□□□□□ -0.65
P04224 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
P04224 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms