Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P04213 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
P04213 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.98□□□□□ -0.49
P04213 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
P04213 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P04213 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
P04213 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.98□□□□□ -0.49
P04213 Gm27390-201ENSMUST00000184516 176 ntBASIC11.98□□□□□ -0.49
P04213 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
P04213 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.98□□□□□ -0.49
P04213 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04213 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04213 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04213 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
P04213 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.98□□□□□ -0.49
P04213 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04213 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04213 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04213 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04213 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04213 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
P04213 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.98□□□□□ -0.49
P04213 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.98□□□□□ -0.49
P04213 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04213 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
P04213 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P04213 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04213 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
P04213 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
P04213 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
P04213 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
P04213 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
P04213 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.97□□□□□ -0.49
P04213 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
P04213 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.97□□□□□ -0.49
P04213 Gm18584-201ENSMUST00000203098 964 ntBASIC11.97□□□□□ -0.49
P04213 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.97□□□□□ -0.49
P04213 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
P04213 Snora73a-201ENSMUST00000082453 205 ntBASIC11.97□□□□□ -0.49
P04213 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.97□□□□□ -0.49
P04213 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
P04213 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
P04213 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.97□□□□□ -0.49
P04213 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
P04213 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
P04213 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04213 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04213 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.96□□□□□ -0.49
P04213 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
P04213 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04213 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
P04213 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
P04213 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04213 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.96□□□□□ -0.49
P04213 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
P04213 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04213 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P04213 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04213 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04213 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.96□□□□□ -0.49
P04213 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04213 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
P04213 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
P04213 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.96□□□□□ -0.49
P04213 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.96□□□□□ -0.49
P04213 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.96□□□□□ -0.49
P04213 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.96□□□□□ -0.49
P04213 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04213 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.96□□□□□ -0.49
P04213 Gm8018-201ENSMUST00000173536 789 ntBASIC11.96□□□□□ -0.49
P04213 Gm27731-201ENSMUST00000185192 107 ntBASIC11.96□□□□□ -0.49
P04213 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.96□□□□□ -0.49
P04213 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.96□□□□□ -0.49
P04213 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.96□□□□□ -0.49
P04213 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.96□□□□□ -0.49
P04213 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04213 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04213 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04213 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04213 Gm24136-201ENSMUST00000083374 165 ntBASIC11.96□□□□□ -0.49
P04213 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
P04213 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P04213 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms