Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.52□□□□□ -0.73
Hoxa3P02831 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Hoxa3P02831 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.51□□□□□ -0.73
Hoxa3P02831 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Hoxa3P02831 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Hoxa3P02831 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Hoxa3P02831 Gm25214-201ENSMUST00000104573 129 ntBASIC10.51□□□□□ -0.73
Hoxa3P02831 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.51□□□□□ -0.73
Hoxa3P02831 Gm14381-201ENSMUST00000122105 414 ntBASIC10.51□□□□□ -0.73
Hoxa3P02831 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.51□□□□□ -0.73
Hoxa3P02831 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.51□□□□□ -0.73
Hoxa3P02831 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.51□□□□□ -0.73
Hoxa3P02831 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.51□□□□□ -0.73
Hoxa3P02831 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.51□□□□□ -0.73
Hoxa3P02831 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.51□□□□□ -0.73
Hoxa3P02831 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Hoxa3P02831 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.51□□□□□ -0.73
Hoxa3P02831 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.51□□□□□ -0.73
Hoxa3P02831 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Hoxa3P02831 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa3P02831 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.5□□□□□ -0.73
Hoxa3P02831 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Hoxa3P02831 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.5□□□□□ -0.73
Hoxa3P02831 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.5□□□□□ -0.73
Hoxa3P02831 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Hoxa3P02831 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Gm10434-201ENSMUST00000101158 471 ntBASIC10.5□□□□□ -0.73
Hoxa3P02831 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Gm15236-201ENSMUST00000117309 379 ntBASIC10.5□□□□□ -0.73
Hoxa3P02831 Gm11531-201ENSMUST00000117614 555 ntBASIC10.5□□□□□ -0.73
Hoxa3P02831 Gm11222-201ENSMUST00000119005 738 ntBASIC10.5□□□□□ -0.73
Hoxa3P02831 Gm13875-201ENSMUST00000120162 282 ntBASIC10.5□□□□□ -0.73
Hoxa3P02831 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.5□□□□□ -0.73
Hoxa3P02831 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Hoxa3P02831 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.5□□□□□ -0.73
Hoxa3P02831 Gm23363-201ENSMUST00000175024 79 ntBASIC10.5□□□□□ -0.73
Hoxa3P02831 Gm27320-201ENSMUST00000184892 109 ntBASIC10.5□□□□□ -0.73
Hoxa3P02831 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.5□□□□□ -0.73
Hoxa3P02831 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.5□□□□□ -0.73
Hoxa3P02831 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.5□□□□□ -0.73
Hoxa3P02831 Gm30285-201ENSMUST00000214614 422 ntBASIC10.5□□□□□ -0.73
Hoxa3P02831 Gm6082-201ENSMUST00000215204 454 ntBASIC10.5□□□□□ -0.73
Hoxa3P02831 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Hoxa3P02831 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Hoxa3P02831 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Hoxa3P02831 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Hoxa3P02831 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms