Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Gm16296-201ENSMUST00000159905 325 ntBASIC11.47□□□□□ -0.57
P01852 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
P01852 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
P01852 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.47□□□□□ -0.57
P01852 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
P01852 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.47□□□□□ -0.57
P01852 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.47□□□□□ -0.57
P01852 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.47□□□□□ -0.57
P01852 Gm7046-201ENSMUST00000221351 977 ntBASIC11.47□□□□□ -0.57
P01852 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.47□□□□□ -0.57
P01852 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
P01852 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
P01852 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
P01852 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
P01852 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
P01852 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
P01852 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.46□□□□□ -0.57
P01852 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
P01852 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.46□□□□□ -0.57
P01852 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.46□□□□□ -0.57
P01852 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.46□□□□□ -0.57
P01852 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
P01852 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
P01852 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
P01852 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.46□□□□□ -0.57
P01852 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.46□□□□□ -0.57
P01852 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.46□□□□□ -0.57
P01852 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01852 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
P01852 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
P01852 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
P01852 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P01852 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P01852 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P01852 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
P01852 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
P01852 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P01852 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
P01852 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
P01852 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
P01852 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01852 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01852 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
P01852 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01852 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01852 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P01852 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
P01852 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01852 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P01852 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.45□□□□□ -0.58
P01852 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01852 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P01852 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
P01852 Daam2-202ENSMUST00000224595 1926 ntBASIC11.45□□□□□ -0.58
P01852 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P01852 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01852 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.45□□□□□ -0.58
P01852 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01852 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01852 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.45□□□□□ -0.58
P01852 Gm15198-201ENSMUST00000117283 177 ntBASIC11.45□□□□□ -0.58
P01852 Gm12241-201ENSMUST00000118330 726 ntBASIC11.45□□□□□ -0.58
P01852 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
P01852 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.45□□□□□ -0.58
P01852 Gm37489-201ENSMUST00000191883 159 ntBASIC11.45□□□□□ -0.58
P01852 Gm38266-201ENSMUST00000194931 421 ntBASIC11.45□□□□□ -0.58
P01852 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.45□□□□□ -0.58
P01852 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P01852 Gm6007-201ENSMUST00000208170 823 ntBASIC11.45□□□□□ -0.58
P01852 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms