Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
TcraP01849 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
TcraP01849 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
TcraP01849 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
TcraP01849 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
TcraP01849 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
TcraP01849 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.15□□□□□ -0.95
TcraP01849 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.15□□□□□ -0.95
TcraP01849 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
TcraP01849 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
TcraP01849 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.95
TcraP01849 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
TcraP01849 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.95
TcraP01849 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
TcraP01849 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
TcraP01849 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC9.15□□□□□ -0.95
TcraP01849 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
TcraP01849 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
TcraP01849 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
TcraP01849 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
TcraP01849 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.14□□□□□ -0.95
TcraP01849 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
TcraP01849 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC9.14□□□□□ -0.95
TcraP01849 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
TcraP01849 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
TcraP01849 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.14□□□□□ -0.95
TcraP01849 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.14□□□□□ -0.95
TcraP01849 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
TcraP01849 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Gm5638-201ENSMUST00000118618 1258 ntBASIC9.14□□□□□ -0.95
TcraP01849 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC9.14□□□□□ -0.95
TcraP01849 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC9.14□□□□□ -0.95
TcraP01849 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Gm27680-201ENSMUST00000184192 160 ntBASIC9.14□□□□□ -0.95
TcraP01849 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC9.14□□□□□ -0.95
TcraP01849 Rbfox2-208ENSMUST00000227930 1218 ntBASIC9.14□□□□□ -0.95
TcraP01849 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
TcraP01849 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
TcraP01849 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
TcraP01849 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
TcraP01849 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
TcraP01849 Gm2420-201ENSMUST00000119864 2149 ntBASIC9.14□□□□□ -0.95
TcraP01849 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.14□□□□□ -0.95
TcraP01849 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
TcraP01849 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
TcraP01849 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TcraP01849 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
TcraP01849 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
TcraP01849 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.13□□□□□ -0.95
TcraP01849 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
TcraP01849 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
TcraP01849 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.13□□□□□ -0.95
TcraP01849 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms