Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm37922-201ENSMUST00000195596 455 ntBASIC12.89□□□□□ -0.35
CopeO89079 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.89□□□□□ -0.35
CopeO89079 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.89□□□□□ -0.35
CopeO89079 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.89□□□□□ -0.35
CopeO89079 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.89□□□□□ -0.35
CopeO89079 Gm15823-201ENSMUST00000064305 670 ntBASIC12.89□□□□□ -0.35
CopeO89079 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CopeO89079 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CopeO89079 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.89□□□□□ -0.35
CopeO89079 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.89□□□□□ -0.35
CopeO89079 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
CopeO89079 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CopeO89079 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.88□□□□□ -0.35
CopeO89079 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
CopeO89079 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CopeO89079 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.88□□□□□ -0.35
CopeO89079 Gm12859-201ENSMUST00000117834 427 ntBASIC12.88□□□□□ -0.35
CopeO89079 Gm13612-201ENSMUST00000119276 390 ntBASIC12.88□□□□□ -0.35
CopeO89079 Gm16479-201ENSMUST00000121706 932 ntBASIC12.88□□□□□ -0.35
CopeO89079 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.88□□□□□ -0.35
CopeO89079 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.88□□□□□ -0.35
CopeO89079 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.88□□□□□ -0.35
CopeO89079 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CopeO89079 Gm8463-201ENSMUST00000208573 613 ntBASIC12.88□□□□□ -0.35
CopeO89079 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.88□□□□□ -0.35
CopeO89079 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CopeO89079 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.88□□□□□ -0.35
CopeO89079 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CopeO89079 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.88□□□□□ -0.35
CopeO89079 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopeO89079 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.87□□□□□ -0.35
CopeO89079 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.87□□□□□ -0.35
CopeO89079 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CopeO89079 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.87□□□□□ -0.35
CopeO89079 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CopeO89079 Gm12384-201ENSMUST00000119228 919 ntBASIC12.87□□□□□ -0.35
CopeO89079 Gm11637-201ENSMUST00000120601 592 ntBASIC12.87□□□□□ -0.35
CopeO89079 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.87□□□□□ -0.35
CopeO89079 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CopeO89079 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
CopeO89079 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Gm37042-201ENSMUST00000193816 581 ntBASIC12.87□□□□□ -0.35
CopeO89079 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.87□□□□□ -0.35
CopeO89079 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms