Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.01□□□□□ -0.49
Hcn1O88704 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hcn1O88704 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.01□□□□□ -0.49
Hcn1O88704 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hcn1O88704 Mir686-201ENSMUST00000102174 109 ntBASIC12.01□□□□□ -0.49
Hcn1O88704 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.01□□□□□ -0.49
Hcn1O88704 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.01□□□□□ -0.49
Hcn1O88704 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.01□□□□□ -0.49
Hcn1O88704 Gm26185-201ENSMUST00000157692 266 ntBASIC12.01□□□□□ -0.49
Hcn1O88704 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.01□□□□□ -0.49
Hcn1O88704 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.01□□□□□ -0.49
Hcn1O88704 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.01□□□□□ -0.49
Hcn1O88704 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.01□□□□□ -0.49
Hcn1O88704 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hcn1O88704 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.01□□□□□ -0.49
Hcn1O88704 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.01□□□□□ -0.49
Hcn1O88704 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.01□□□□□ -0.49
Hcn1O88704 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.01□□□□□ -0.49
Hcn1O88704 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hcn1O88704 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hcn1O88704 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Hcn1O88704 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Gm23931-201ENSMUST00000103842 109 ntBASIC12□□□□□ -0.49
Hcn1O88704 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12□□□□□ -0.49
Hcn1O88704 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12□□□□□ -0.49
Hcn1O88704 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Gm43438-201ENSMUST00000198133 379 ntBASIC12□□□□□ -0.49
Hcn1O88704 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12□□□□□ -0.49
Hcn1O88704 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12□□□□□ -0.49
Hcn1O88704 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12□□□□□ -0.49
Hcn1O88704 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12□□□□□ -0.49
Hcn1O88704 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hcn1O88704 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12□□□□□ -0.49
Hcn1O88704 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12□□□□□ -0.49
Hcn1O88704 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12□□□□□ -0.49
Hcn1O88704 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hcn1O88704 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.99□□□□□ -0.49
Hcn1O88704 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hcn1O88704 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.99□□□□□ -0.49
Hcn1O88704 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hcn1O88704 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Hcn1O88704 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.99□□□□□ -0.49
Hcn1O88704 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.99□□□□□ -0.49
Hcn1O88704 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Hcn1O88704 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.99□□□□□ -0.49
Hcn1O88704 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.99□□□□□ -0.49
Hcn1O88704 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.99□□□□□ -0.49
Hcn1O88704 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.99□□□□□ -0.49
Hcn1O88704 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.99□□□□□ -0.49
Hcn1O88704 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hcn1O88704 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms