Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops6O88545 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops6O88545 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cops6O88545 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cops6O88545 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cops6O88545 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.22■□□□□ 0.03
Cops6O88545 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cops6O88545 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Gm22133-201ENSMUST00000102082 109 ntBASIC15.22■□□□□ 0.03
Cops6O88545 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Gm15515-201ENSMUST00000117827 822 ntBASIC15.22■□□□□ 0.03
Cops6O88545 Gm6335-201ENSMUST00000118081 1194 ntBASIC15.22■□□□□ 0.03
Cops6O88545 Gm7816-201ENSMUST00000119884 1194 ntBASIC15.22■□□□□ 0.03
Cops6O88545 Gm11450-201ENSMUST00000121144 333 ntBASIC15.22■□□□□ 0.03
Cops6O88545 Gm15542-201ENSMUST00000121585 1194 ntBASIC15.22■□□□□ 0.03
Cops6O88545 n-R5s14-201ENSMUST00000122688 107 ntBASIC15.22■□□□□ 0.03
Cops6O88545 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC15.22■□□□□ 0.03
Cops6O88545 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC15.22■□□□□ 0.03
Cops6O88545 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC15.22■□□□□ 0.03
Cops6O88545 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Cops6O88545 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC15.22■□□□□ 0.03
Cops6O88545 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Spcs1-203ENSMUST00000226374 592 ntBASIC15.22■□□□□ 0.03
Cops6O88545 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.22■□□□□ 0.03
Cops6O88545 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cops6O88545 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Gm37324-201ENSMUST00000194500 4504 ntBASIC15.22■□□□□ 0.03
Cops6O88545 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cops6O88545 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cops6O88545 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.21■□□□□ 0.03
Cops6O88545 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Gm13611-201ENSMUST00000118269 318 ntBASIC15.21■□□□□ 0.03
Cops6O88545 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.21■□□□□ 0.03
Cops6O88545 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC15.21■□□□□ 0.03
Cops6O88545 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cops6O88545 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cops6O88545 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC15.21■□□□□ 0.03
Cops6O88545 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops6O88545 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cops6O88545 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cops6O88545 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cops6O88545 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC15.21■□□□□ 0.02
Cops6O88545 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cops6O88545 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cops6O88545 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cops6O88545 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cops6O88545 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cops6O88545 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cops6O88545 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops6O88545 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops6O88545 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cops6O88545 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops6O88545 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cops6O88545 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops6O88545 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cops6O88545 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops6O88545 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cops6O88545 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cops6O88545 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cops6O88545 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops6O88545 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops6O88545 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Cops6O88545 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops6O88545 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cops6O88545 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC15.2■□□□□ 0.02
Cops6O88545 Gm18038-201ENSMUST00000197900 485 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms