Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Pdlim1O70400 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pdlim1O70400 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pdlim1O70400 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pdlim1O70400 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Pdlim1O70400 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pdlim1O70400 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.39□□□□□ -0.43
Pdlim1O70400 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Pdlim1O70400 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.39□□□□□ -0.43
Pdlim1O70400 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pdlim1O70400 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.39□□□□□ -0.43
Pdlim1O70400 Gm13875-201ENSMUST00000120162 282 ntBASIC12.39□□□□□ -0.43
Pdlim1O70400 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.39□□□□□ -0.43
Pdlim1O70400 Gm38266-201ENSMUST00000194931 421 ntBASIC12.39□□□□□ -0.43
Pdlim1O70400 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.39□□□□□ -0.43
Pdlim1O70400 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Pdlim1O70400 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.39□□□□□ -0.43
Pdlim1O70400 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.39□□□□□ -0.43
Pdlim1O70400 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.39□□□□□ -0.43
Pdlim1O70400 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.39□□□□□ -0.43
Pdlim1O70400 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Pdlim1O70400 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.39□□□□□ -0.43
Pdlim1O70400 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pdlim1O70400 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim1O70400 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.38□□□□□ -0.43
Pdlim1O70400 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Gm14999-201ENSMUST00000121039 624 ntBASIC12.38□□□□□ -0.43
Pdlim1O70400 Gm13570-201ENSMUST00000140763 309 ntBASIC12.38□□□□□ -0.43
Pdlim1O70400 Gm26956-201ENSMUST00000182176 986 ntBASIC12.38□□□□□ -0.43
Pdlim1O70400 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Gm21769-201ENSMUST00000211922 111 ntBASIC12.38□□□□□ -0.43
Pdlim1O70400 Gm5950-201ENSMUST00000213337 772 ntBASIC12.38□□□□□ -0.43
Pdlim1O70400 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms