Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Itgb3O54890 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Itgb3O54890 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Itgb3O54890 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Itgb3O54890 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Itgb3O54890 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Itgb3O54890 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Itgb3O54890 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Itgb3O54890 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.25□□□□□ -0.29
Itgb3O54890 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.25□□□□□ -0.29
Itgb3O54890 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.25□□□□□ -0.29
Itgb3O54890 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.25□□□□□ -0.29
Itgb3O54890 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.25□□□□□ -0.29
Itgb3O54890 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Gm15276-201ENSMUST00000145953 498 ntBASIC13.25□□□□□ -0.29
Itgb3O54890 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.25□□□□□ -0.29
Itgb3O54890 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Itgb3O54890 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.25□□□□□ -0.29
Itgb3O54890 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Gm8885-201ENSMUST00000189382 598 ntBASIC13.25□□□□□ -0.29
Itgb3O54890 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Gm13097-201ENSMUST00000210722 397 ntBASIC13.25□□□□□ -0.29
Itgb3O54890 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.25□□□□□ -0.29
Itgb3O54890 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Gm10312-201ENSMUST00000078515 489 ntBASIC13.25□□□□□ -0.29
Itgb3O54890 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Itgb3O54890 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Itgb3O54890 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Itgb3O54890 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Itgb3O54890 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Itgb3O54890 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.24□□□□□ -0.29
Itgb3O54890 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.24□□□□□ -0.29
Itgb3O54890 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Itgb3O54890 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Itgb3O54890 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Itgb3O54890 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Itgb3O54890 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.24□□□□□ -0.29
Itgb3O54890 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 AA914427-201ENSMUST00000193194 1166 ntBASIC13.24□□□□□ -0.29
Itgb3O54890 Gm44967-201ENSMUST00000207047 631 ntBASIC13.24□□□□□ -0.29
Itgb3O54890 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.24□□□□□ -0.29
Itgb3O54890 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.24□□□□□ -0.29
Itgb3O54890 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.24□□□□□ -0.29
Itgb3O54890 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.24□□□□□ -0.29
Itgb3O54890 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Itgb3O54890 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Itgb3O54890 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Itgb3O54890 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Itgb3O54890 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Itgb3O54890 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.23□□□□□ -0.29
Itgb3O54890 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Itgb3O54890 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Itgb3O54890 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms