Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ChkaO54804 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.65□□□□□ -0.38
ChkaO54804 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.65□□□□□ -0.38
ChkaO54804 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ChkaO54804 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
ChkaO54804 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ChkaO54804 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ChkaO54804 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
ChkaO54804 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
ChkaO54804 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.65□□□□□ -0.38
ChkaO54804 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.65□□□□□ -0.38
ChkaO54804 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.65□□□□□ -0.38
ChkaO54804 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ChkaO54804 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ChkaO54804 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.65□□□□□ -0.38
ChkaO54804 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.65□□□□□ -0.38
ChkaO54804 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ChkaO54804 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
ChkaO54804 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ChkaO54804 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.65□□□□□ -0.38
ChkaO54804 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ChkaO54804 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ChkaO54804 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ChkaO54804 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ChkaO54804 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.65□□□□□ -0.39
ChkaO54804 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
ChkaO54804 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ChkaO54804 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ChkaO54804 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.64□□□□□ -0.39
ChkaO54804 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ChkaO54804 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.64□□□□□ -0.39
ChkaO54804 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.64□□□□□ -0.39
ChkaO54804 Gm11964-201ENSMUST00000120982 444 ntBASIC12.64□□□□□ -0.39
ChkaO54804 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.64□□□□□ -0.39
ChkaO54804 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.64□□□□□ -0.39
ChkaO54804 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.64□□□□□ -0.39
ChkaO54804 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Gm24526-201ENSMUST00000082921 158 ntBASIC12.64□□□□□ -0.39
ChkaO54804 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ChkaO54804 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.64□□□□□ -0.39
ChkaO54804 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.64□□□□□ -0.39
ChkaO54804 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.64□□□□□ -0.39
ChkaO54804 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ChkaO54804 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ChkaO54804 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
ChkaO54804 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
ChkaO54804 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Gm5745-201ENSMUST00000183748 313 ntBASIC12.63□□□□□ -0.39
ChkaO54804 Gm27390-201ENSMUST00000184516 176 ntBASIC12.63□□□□□ -0.39
ChkaO54804 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.63□□□□□ -0.39
ChkaO54804 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.63□□□□□ -0.39
ChkaO54804 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
ChkaO54804 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms