Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Polr1aO35134 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Polr1aO35134 Gm3671-201ENSMUST00000182463 1007 ntBASIC18.89■□□□□ 0.61
Polr1aO35134 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Polr1aO35134 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Polr1aO35134 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC18.89■□□□□ 0.61
Polr1aO35134 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr1aO35134 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr1aO35134 Gm43447-201ENSMUST00000198471 1535 ntBASIC18.89■□□□□ 0.61
Polr1aO35134 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr1aO35134 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr1aO35134 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Polr1aO35134 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Polr1aO35134 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Polr1aO35134 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr1aO35134 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr1aO35134 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr1aO35134 Gm37513-201ENSMUST00000194830 2268 ntBASIC18.89■□□□□ 0.61
Polr1aO35134 Gm38378-201ENSMUST00000195153 2268 ntBASIC18.89■□□□□ 0.61
Polr1aO35134 Gm7114-201ENSMUST00000190159 1789 ntBASIC18.89■□□□□ 0.61
Polr1aO35134 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Polr1aO35134 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Polr1aO35134 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Polr1aO35134 Gm6189-201ENSMUST00000164487 2082 ntBASIC18.88■□□□□ 0.61
Polr1aO35134 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC18.88■□□□□ 0.61
Polr1aO35134 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
Polr1aO35134 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr1aO35134 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr1aO35134 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr1aO35134 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr1aO35134 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr1aO35134 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr1aO35134 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Polr1aO35134 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr1aO35134 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr1aO35134 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Polr1aO35134 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Polr1aO35134 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr1aO35134 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC18.88■□□□□ 0.61
Polr1aO35134 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC18.88■□□□□ 0.61
Polr1aO35134 Gm27910-201ENSMUST00000185004 107 ntBASIC18.88■□□□□ 0.61
Polr1aO35134 Gm44329-201ENSMUST00000197469 112 ntBASIC18.88■□□□□ 0.61
Polr1aO35134 Gm25517-201ENSMUST00000083865 134 ntBASIC18.88■□□□□ 0.61
Polr1aO35134 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Polr1aO35134 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr1aO35134 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr1aO35134 AC159195.1-201ENSMUST00000225867 2086 ntBASIC18.88■□□□□ 0.61
Polr1aO35134 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr1aO35134 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr1aO35134 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr1aO35134 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Polr1aO35134 Gm45266-201ENSMUST00000210111 2173 ntBASIC18.87■□□□□ 0.61
Polr1aO35134 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr1aO35134 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Polr1aO35134 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr1aO35134 Gm6198-201ENSMUST00000191337 2929 ntBASIC18.87■□□□□ 0.61
Polr1aO35134 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Polr1aO35134 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr1aO35134 Gm1848-201ENSMUST00000120711 789 ntBASIC18.87■□□□□ 0.61
Polr1aO35134 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC18.87■□□□□ 0.61
Polr1aO35134 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Polr1aO35134 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC18.87■□□□□ 0.61
Polr1aO35134 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC18.87■□□□□ 0.61
Polr1aO35134 Gm17877-201ENSMUST00000192578 814 ntBASIC18.87■□□□□ 0.61
Polr1aO35134 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Polr1aO35134 Gm44506-201ENSMUST00000206278 965 ntBASIC18.87■□□□□ 0.61
Polr1aO35134 Gm6108-201ENSMUST00000208365 367 ntBASIC18.87■□□□□ 0.61
Polr1aO35134 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC18.87■□□□□ 0.61
Polr1aO35134 Gm5451-201ENSMUST00000080545 579 ntBASIC18.87■□□□□ 0.61
Polr1aO35134 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Polr1aO35134 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr1aO35134 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr1aO35134 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr1aO35134 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr1aO35134 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC18.87■□□□□ 0.61
Polr1aO35134 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC18.87■□□□□ 0.61
Polr1aO35134 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr1aO35134 Gm44260-201ENSMUST00000204946 2094 ntBASIC18.87■□□□□ 0.61
Polr1aO35134 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Polr1aO35134 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr1aO35134 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr1aO35134 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr1aO35134 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC18.86■□□□□ 0.61
Polr1aO35134 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC18.86■□□□□ 0.61
Polr1aO35134 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Polr1aO35134 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Polr1aO35134 Gm29155-201ENSMUST00000185910 269 ntBASIC18.86■□□□□ 0.61
Polr1aO35134 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr1aO35134 Gm2875-201ENSMUST00000211333 360 ntBASIC18.86■□□□□ 0.61
Polr1aO35134 Prrxl1-205ENSMUST00000228878 723 ntBASIC18.86■□□□□ 0.61
Polr1aO35134 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr1aO35134 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC18.86■□□□□ 0.61
Polr1aO35134 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Polr1aO35134 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr1aO35134 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr1aO35134 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr1aO35134 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Polr1aO35134 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Polr1aO35134 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr1aO35134 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms