Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.04□□□□□ -0.32
Ebf3O08791 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Ebf3O08791 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.04□□□□□ -0.32
Ebf3O08791 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.04□□□□□ -0.32
Ebf3O08791 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.04□□□□□ -0.32
Ebf3O08791 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.04□□□□□ -0.32
Ebf3O08791 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.04□□□□□ -0.32
Ebf3O08791 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ebf3O08791 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.04□□□□□ -0.32
Ebf3O08791 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ebf3O08791 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ebf3O08791 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.03□□□□□ -0.32
Ebf3O08791 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Mir874-201ENSMUST00000104769 76 ntBASIC13.03□□□□□ -0.32
Ebf3O08791 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ebf3O08791 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ebf3O08791 Gm14109-201ENSMUST00000118814 309 ntBASIC13.03□□□□□ -0.32
Ebf3O08791 Gm13665-201ENSMUST00000120830 528 ntBASIC13.03□□□□□ -0.32
Ebf3O08791 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.03□□□□□ -0.32
Ebf3O08791 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.03□□□□□ -0.32
Ebf3O08791 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.03□□□□□ -0.32
Ebf3O08791 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.03□□□□□ -0.32
Ebf3O08791 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.03□□□□□ -0.32
Ebf3O08791 Gm45925-201ENSMUST00000218882 744 ntBASIC13.03□□□□□ -0.32
Ebf3O08791 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.03□□□□□ -0.32
Ebf3O08791 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Ebf3O08791 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.03□□□□□ -0.32
Ebf3O08791 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.03□□□□□ -0.32
Ebf3O08791 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ebf3O08791 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf3O08791 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf3O08791 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf3O08791 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf3O08791 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf3O08791 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Ebf3O08791 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf3O08791 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.02□□□□□ -0.32
Ebf3O08791 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf3O08791 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf3O08791 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Ebf3O08791 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ebf3O08791 Gm26361-201ENSMUST00000158868 186 ntBASIC13.02□□□□□ -0.33
Ebf3O08791 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ebf3O08791 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.02□□□□□ -0.33
Ebf3O08791 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf3O08791 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ebf3O08791 Mir5120-201ENSMUST00000175020 78 ntBASIC13.02□□□□□ -0.33
Ebf3O08791 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.02□□□□□ -0.33
Ebf3O08791 Gm44405-201ENSMUST00000198952 126 ntBASIC13.02□□□□□ -0.33
Ebf3O08791 Gm19208-201ENSMUST00000213861 912 ntBASIC13.02□□□□□ -0.33
Ebf3O08791 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.02□□□□□ -0.33
Ebf3O08791 Gm8712-201ENSMUST00000221090 701 ntBASIC13.02□□□□□ -0.33
Ebf3O08791 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf3O08791 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf3O08791 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf3O08791 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf3O08791 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf3O08791 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf3O08791 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf3O08791 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf3O08791 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms