Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ccdc180J3QNE4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ccdc180J3QNE4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Gm14314-201ENSMUST00000118225 1015 ntBASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Snora73b-201ENSMUST00000083419 205 ntBASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Gm18782-201ENSMUST00000209023 1399 ntBASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc180J3QNE4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Gm4310-201ENSMUST00000177847 889 ntBASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Gm10305-201ENSMUST00000195331 2475 ntBASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Gm15352-201ENSMUST00000118696 270 ntBASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Ighv5-11-201ENSMUST00000193354 371 ntBASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Gm18974-201ENSMUST00000221478 1031 ntBASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc180J3QNE4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Ccdc180J3QNE4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Ccdc180J3QNE4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Ccdc180J3QNE4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
Ccdc180J3QNE4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Gm24891-201ENSMUST00000104391 136 ntBASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Gm12856-201ENSMUST00000119471 1293 ntBASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Gm43830-201ENSMUST00000198760 1067 ntBASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Gm45575-201ENSMUST00000210283 548 ntBASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc180J3QNE4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 AC122840.1-201ENSMUST00000220915 3334 ntBASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Gm42863-201ENSMUST00000197875 2958 ntBASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Gm12795-201ENSMUST00000117594 539 ntBASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Gm6867-201ENSMUST00000219165 425 ntBASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ccdc180J3QNE4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms