Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Gm13365-201ENSMUST00000121188 973 ntBASIC12.84□□□□□ -0.35
Trim55G3X8Y1 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim55G3X8Y1 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim55G3X8Y1 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim55G3X8Y1 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim55G3X8Y1 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Cog3-203ENSMUST00000227473 4197 ntBASIC12.83□□□□□ -0.36
Trim55G3X8Y1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Mir6956-201ENSMUST00000183598 62 ntBASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Gm5312-201ENSMUST00000203728 547 ntBASIC12.83□□□□□ -0.36
Trim55G3X8Y1 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.83□□□□□ -0.36
Trim55G3X8Y1 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim55G3X8Y1 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.82□□□□□ -0.36
Trim55G3X8Y1 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.82□□□□□ -0.36
Trim55G3X8Y1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Gm19184-201ENSMUST00000196798 928 ntBASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Gm44335-201ENSMUST00000196879 141 ntBASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Gm44297-201ENSMUST00000198304 141 ntBASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Gm44346-201ENSMUST00000198851 141 ntBASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Gm19931-201ENSMUST00000198920 368 ntBASIC12.82□□□□□ -0.36
Trim55G3X8Y1 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim55G3X8Y1 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms