Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Gm15370-201ENSMUST00000117158 253 ntBASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Gm4986-201ENSMUST00000119731 549 ntBASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Gm13297-201ENSMUST00000120205 934 ntBASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Gm37489-201ENSMUST00000191883 159 ntBASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Gm18935-201ENSMUST00000212692 664 ntBASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Morn2-202ENSMUST00000227729 656 ntBASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Gm24136-201ENSMUST00000083374 165 ntBASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Gm14999-201ENSMUST00000121039 624 ntBASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Gm27023-201ENSMUST00000182372 285 ntBASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Gm44124-201ENSMUST00000204159 472 ntBASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 118.3 ms