Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Srp54bE9PXC0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Srp54bE9PXC0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Srp54bE9PXC0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Srp54bE9PXC0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Srp54bE9PXC0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Srp54bE9PXC0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Gm4909-201ENSMUST00000118749 794 ntBASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Rmrp-201ENSMUST00000157463 271 ntBASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.37□□□□□ -0.43
Srp54bE9PXC0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.37□□□□□ -0.43
Srp54bE9PXC0 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Gm8385-201ENSMUST00000058999 643 ntBASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp54bE9PXC0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Gm13296-201ENSMUST00000117854 997 ntBASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Gm12314-201ENSMUST00000118104 538 ntBASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Gm15703-201ENSMUST00000120250 880 ntBASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Gm5070-201ENSMUST00000177599 862 ntBASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Rprl1-202ENSMUST00000198476 238 ntBASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Gm43138-201ENSMUST00000199123 708 ntBASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp54bE9PXC0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Srp54bE9PXC0 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.35□□□□□ -0.43
Srp54bE9PXC0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms