Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Gm26313-201ENSMUST00000157770 308 ntBASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Mir6359-201ENSMUST00000183668 81 ntBASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Gm4943-201ENSMUST00000132879 424 ntBASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Gm25492-201ENSMUST00000157383 129 ntBASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Gm9162-201ENSMUST00000182081 991 ntBASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Gm9523-201ENSMUST00000199146 1159 ntBASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Gm15703-201ENSMUST00000120250 880 ntBASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Zfp419-201ENSMUST00000173446 916 ntBASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Gm8234-201ENSMUST00000198523 1107 ntBASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Gm8019-201ENSMUST00000119317 587 ntBASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a3E9PWQ3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Gm25554-201ENSMUST00000158075 113 ntBASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Gm18621-201ENSMUST00000222677 679 ntBASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Gm42689-201ENSMUST00000202403 404 ntBASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a3E9PWQ3 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms