Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Gm18935-201ENSMUST00000212692 664 ntBASIC12.22□□□□□ -0.45
Clip3B9EHT4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Clip3B9EHT4 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.21□□□□□ -0.45
Clip3B9EHT4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.21□□□□□ -0.45
Clip3B9EHT4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clip3B9EHT4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.21□□□□□ -0.45
Clip3B9EHT4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Clip3B9EHT4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clip3B9EHT4 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Gm38266-201ENSMUST00000194931 421 ntBASIC12.21□□□□□ -0.45
Clip3B9EHT4 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Gm18584-201ENSMUST00000203098 964 ntBASIC12.21□□□□□ -0.45
Clip3B9EHT4 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip3B9EHT4 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip3B9EHT4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clip3B9EHT4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clip3B9EHT4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clip3B9EHT4 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clip3B9EHT4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clip3B9EHT4 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.21□□□□□ -0.46
Clip3B9EHT4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.21□□□□□ -0.46
Clip3B9EHT4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clip3B9EHT4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clip3B9EHT4 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.2□□□□□ -0.46
Clip3B9EHT4 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Gm14704-201ENSMUST00000120300 874 ntBASIC12.2□□□□□ -0.46
Clip3B9EHT4 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.2□□□□□ -0.46
Clip3B9EHT4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Gm8738-201ENSMUST00000172606 329 ntBASIC12.2□□□□□ -0.46
Clip3B9EHT4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.2□□□□□ -0.46
Clip3B9EHT4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.2□□□□□ -0.46
Clip3B9EHT4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Gm45930-201ENSMUST00000221330 292 ntBASIC12.2□□□□□ -0.46
Clip3B9EHT4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.2□□□□□ -0.46
Clip3B9EHT4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip3B9EHT4 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms