Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Mir6977-201ENSMUST00000184960 64 ntBASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Gm15371-201ENSMUST00000117057 784 ntBASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.1□□□□□ -0.63
Gm11127A7VMS2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Mir6392-201ENSMUST00000184924 108 ntBASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Gm37917-201ENSMUST00000194711 392 ntBASIC11.1□□□□□ -0.63
Gm11127A7VMS2 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.1□□□□□ -0.63
Gm11127A7VMS2 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm11127A7VMS2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.09□□□□□ -0.63
Gm11127A7VMS2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Gm11127A7VMS2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.09□□□□□ -0.63
Gm11127A7VMS2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm11127A7VMS2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm11127A7VMS2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm11127A7VMS2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm11127A7VMS2 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm11127A7VMS2 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms