Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Gm45770-201ENSMUST00000212105 616 ntBASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Scn3aA2ASI5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Scn3aA2ASI5 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.83□□□□□ -0.19
Scn3aA2ASI5 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.83□□□□□ -0.19
Scn3aA2ASI5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn3aA2ASI5 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Gm8343-201ENSMUST00000182705 994 ntBASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Gm18711-201ENSMUST00000199341 750 ntBASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.83□□□□□ -0.2
Scn3aA2ASI5 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Gm12501-201ENSMUST00000119163 529 ntBASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Gm13408-201ENSMUST00000119822 798 ntBASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Gm13935-201ENSMUST00000121859 798 ntBASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Gm22902-201ENSMUST00000158488 302 ntBASIC13.82□□□□□ -0.2
Scn3aA2ASI5 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Gm5705-201ENSMUST00000066241 711 ntBASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.82□□□□□ -0.2
Scn3aA2ASI5 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Gm12165-201ENSMUST00000117047 342 ntBASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Gm13035-201ENSMUST00000117496 342 ntBASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Gm14263-201ENSMUST00000117955 746 ntBASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Mir6546-201ENSMUST00000184460 62 ntBASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Gm28686-201ENSMUST00000187404 609 ntBASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Gm37246-201ENSMUST00000192665 835 ntBASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3aA2ASI5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms