Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Rmrp-201ENSMUST00000157463 271 ntBASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Gm9002-201ENSMUST00000178437 499 ntBASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc112A0AUP1 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.27□□□□□ -0.12
Ccdc112A0AUP1 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms