Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim17A0A504 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim17A0A504 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim17A0A504 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.31□□□□□ -0.6
Smim17A0A504 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim17A0A504 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim17A0A504 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim17A0A504 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim17A0A504 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Smim17A0A504 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim17A0A504 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Smim17A0A504 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim17A0A504 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim17A0A504 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim17A0A504 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Smim17A0A504 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Smim17A0A504 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim17A0A504 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim17A0A504 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smim17A0A504 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.3□□□□□ -0.6
Smim17A0A504 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Smim17A0A504 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.3□□□□□ -0.6
Smim17A0A504 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.3□□□□□ -0.6
Smim17A0A504 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smim17A0A504 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Smim17A0A504 Gm18766-201ENSMUST00000189811 808 ntBASIC11.3□□□□□ -0.6
Smim17A0A504 Gm5264-201ENSMUST00000190584 848 ntBASIC11.3□□□□□ -0.6
Smim17A0A504 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smim17A0A504 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.3□□□□□ -0.6
Smim17A0A504 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smim17A0A504 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smim17A0A504 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.3□□□□□ -0.6
Smim17A0A504 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Btrc-209ENSMUST00000224478 2194 ntBASIC11.3□□□□□ -0.6
Smim17A0A504 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim17A0A504 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Smim17A0A504 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.29□□□□□ -0.6
Smim17A0A504 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.29□□□□□ -0.6
Smim17A0A504 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.29□□□□□ -0.6
Smim17A0A504 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Smim17A0A504 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Gm15393-201ENSMUST00000120499 219 ntBASIC11.29□□□□□ -0.6
Smim17A0A504 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.29□□□□□ -0.6
Smim17A0A504 Gm18889-201ENSMUST00000174284 929 ntBASIC11.29□□□□□ -0.6
Smim17A0A504 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.29□□□□□ -0.6
Smim17A0A504 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smim17A0A504 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.29□□□□□ -0.6
Smim17A0A504 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smim17A0A504 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.29□□□□□ -0.6
Smim17A0A504 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smim17A0A504 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms